idmjky / EvolvePro
PLM based active learning model for protein engineering
☆71Updated 5 months ago
Alternatives and similar repositories for EvolvePro:
Users that are interested in EvolvePro are comparing it to the libraries listed below
- ☆60Updated last month
- ☆49Updated 7 months ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆48Updated 7 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆68Updated 2 weeks ago
- Inference code for PoET: A generative model of protein families as sequences-of-sequences☆57Updated 9 months ago
- Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape☆27Updated 5 months ago
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆49Updated 5 months ago
- Protein Design by Machine Learning guided Directed Evolution☆32Updated 6 months ago
- ☆72Updated this week
- Protein language model trained on coding DNA☆42Updated 3 months ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆50Updated 9 months ago
- SaprotHub: Making Protein Modeling Accessible to All Biologists☆89Updated this week
- ☆91Updated 6 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆31Updated 2 months ago
- Protein folding in Pymol☆104Updated 2 weeks ago
- Nature Methods: RhoFold+, Accurate RNA 3D structure prediction using a language model-based deep learning approach☆78Updated last month
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆120Updated last month
- Neural networks to fit interpretable models and quantify energies, energetic couplings, epistasis, and allostery from deep mutational sca…☆43Updated last month
- Improved antibody structure-based design using inverse folding☆88Updated 2 weeks ago
- ☆66Updated 4 months ago
- RNA Multiple Sequence Alignment☆30Updated last year
- Predict the structure of immune receptor proteins☆48Updated 2 months ago
- A domain parser for Alphafold models☆32Updated last year
- Fast protein structure searching or your money back☆93Updated last month
- Toolkit for alphafold3 input and output files☆59Updated this week
- Protein design and variant prediction using autoregressive generative models☆95Updated last year
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆45Updated 6 months ago
- Geometric deep learning of protein–DNA binding specificity☆60Updated 3 months ago
- Results and data from the pilot round of the Protein Engineering Tournament☆26Updated last month
- Parametric Building of de novo Functional Topologies☆44Updated 2 years ago