microsoft / evodiffLinks
Generation of protein sequences and evolutionary alignments via discrete diffusion models
☆633Updated 2 months ago
Alternatives and similar repositories for evodiff
Users that are interested in evodiff are comparing it to the libraries listed below
Sorting:
- Diffusion models of protein structure; trigonometry and attention are all you need!☆552Updated last year
- ☆741Updated 2 months ago
- A generative model for programmable protein design☆755Updated last year
- Making Protein Design accessible to all via Google Colab!☆773Updated 2 months ago
- Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch☆794Updated last week
- Official release of the ProGen models☆668Updated 2 years ago
- User friendly and accurate binder design pipeline☆640Updated 2 weeks ago
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆472Updated 7 months ago
- RoseTTAFold2 protein/nucleic acid complex prediction☆365Updated last year
- Official repository for the ProteinGym benchmarks☆340Updated last month
- OmegaFold Release Code☆596Updated 2 years ago
- Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking☆1,306Updated 3 months ago
- Inference code for scalable emulation of protein equilibrium ensembles with generative deep learning☆613Updated last week
- Colab Notebooks covering deep learning tools for biomolecular structure prediction and design☆415Updated 4 months ago
- Code for the ProteinMPNN paper☆1,413Updated last year
- Public RFDiffusionAA repo☆426Updated last year
- Saprot: Protein Language Model with Structural Alphabet (AA+3Di)☆489Updated last week
- ☆252Updated last year
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆317Updated 9 months ago
- Foldseek enables fast and sensitive comparisons of large structure sets.☆1,029Updated last week
- ☆581Updated last year
- EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein☆513Updated 6 months ago
- ☆544Updated 4 months ago
- ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)☆342Updated 2 years ago
- Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies☆371Updated last year
- A trainable PyTorch reproduction of AlphaFold 3.☆1,278Updated this week
- ☆342Updated last year
- List of computational protein design research labs☆190Updated 6 months ago
- Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design☆600Updated last year
- BioNeMo Framework: For building and adapting AI models in drug discovery at scale☆485Updated last week