Alternatives and similar repositories for evodiff

Users that are interested in evodiff are comparing it to the libraries listed below

• microsoft / foldingdiff
  Diffusion models of protein structure; trigonometry and attention are all you need!
  ☆546Updated last year
• generatebio / chroma
  A generative model for programmable protein design
  ☆746Updated last year
• sokrypton / ColabDesign
  Making Protein Design accessible to all via Google Colab!
  ☆755Updated last month
• baker-laboratory / RoseTTAFold-All-Atom
  ☆730Updated last month
• salesforce / progen
  Official release of the ProGen models
  ☆655Updated last year
• bjing2016 / alphaflow
  AlphaFold Meets Flow Matching for Generating Protein Ensembles
  ☆455Updated 6 months ago
• HeliXonProtein / OmegaFold
  OmegaFold Release Code
  ☆589Updated 2 years ago
• uw-ipd / RoseTTAFold2NA
  RoseTTAFold2 protein/nucleic acid complex prediction
  ☆360Updated last year
• gcorso / DiffDock
  Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
  ☆1,284Updated 2 months ago
• martinpacesa / BindCraft
  User friendly and accurate binder design pipeline
  ☆591Updated last week
• microsoft / bioemu
  Inference code for scalable emulation of protein equilibrium ensembles with generative deep learning
  ☆422Updated this week
• luost26 / diffab
  ✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)
  ☆333Updated 2 years ago
• kyegomez / Open-AF3
  Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch
  ☆790Updated last week
• OATML-Markslab / ProteinGym
  Official repository for the ProteinGym benchmarks
  ☆330Updated last month
• microsoft / protein-sequence-models
  ☆248Updated 11 months ago
• dauparas / ProteinMPNN
  Code for the ProteinMPNN paper
  ☆1,349Updated 10 months ago
• RosettaCommons / protein_generator
  Joint sequence and structure generation with RoseTTAFold sequence space diffusion
  ☆312Updated 8 months ago
• RosettaCommons / PyRosetta.notebooks
  Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design
  ☆584Updated 11 months ago
• baker-laboratory / rf_diffusion_all_atom
  Public RFDiffusionAA repo
  ☆406Updated last year
• Graylab / DL4Proteins-notebooks
  Colab Notebooks covering deep learning tools for biomolecular structure prediction and design
  ☆404Updated 3 months ago
• Graylab / IgFold
  Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies
  ☆365Updated last year
• dauparas / LigandMPNN
  ☆403Updated 5 months ago
• HannesStark / EquiBind
  EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein
  ☆510Updated 4 months ago
• NVIDIA / bionemo-framework
  BioNeMo Framework: For building and adapting AI models in drug discovery at scale
  ☆460Updated this week
• westlake-repl / SaProt
  Saprot: Protein Language Model with Structural Alphabet (AA+3Di)
  ☆471Updated last month
• adaptyvbio / ProteinFlow
  Versatile computational pipeline for processing protein structure data for deep learning applications.
  ☆264Updated last year
• dptech-corp / Uni-Fold
  An open-source platform for developing protein models beyond AlphaFold.
  ☆396Updated last year
• YoshitakaMo / localcolabfold
  ColabFold on your local PC
  ☆716Updated 2 weeks ago
• steineggerlab / foldseek
  Foldseek enables fast and sensitive comparisons of large structure sets.
  ☆1,004Updated last month
• nrbennet / dl_binder_design
  ☆329Updated 11 months ago