Joint sequence and structure generation with RoseTTAFold sequence space diffusion
☆334Oct 28, 2024Updated last year
Alternatives and similar repositories for protein_generator
Users that are interested in protein_generator are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A generative model for programmable protein design☆818Apr 11, 2024Updated 2 years ago
- Diffusion-based all-atom protein generative model.☆236Aug 27, 2025Updated 8 months ago
- Making Protein Design accessible to all via Google Colab!☆914Apr 6, 2026Updated last month
- Protein hallucination and inpainting with RoseTTAFold☆281Mar 30, 2023Updated 3 years ago
- Implementation for SE(3) diffusion model with application to protein backbone generation☆421Jul 3, 2023Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆212Apr 21, 2025Updated last year
- ☆149Jul 16, 2025Updated 10 months ago
- Public RFDiffusionAA repo☆482Jul 9, 2024Updated last year
- ☆213Sep 24, 2024Updated last year
- Code for running RFdiffusion☆2,871Apr 24, 2026Updated 3 weeks ago
- Code for the ProteinMPNN paper☆1,734Aug 14, 2024Updated last year
- ☆404Aug 7, 2024Updated last year
- Generation of protein sequences and evolutionary alignments via discrete diffusion models☆669Jan 15, 2026Updated 4 months ago
- ☆809Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- De Novo Protein Design by Equivariantly Diffusing Oriented Residue Clouds☆188Apr 21, 2024Updated 2 years ago
- GNN trained to predict changes in thermodynamic stability for protein point mutants☆252Mar 26, 2026Updated last month
- List of papers about Proteins Design using Deep Learning☆1,929May 3, 2026Updated 3 weeks ago
- RoseTTAFold2 protein/nucleic acid complex prediction☆380Jun 3, 2024Updated last year
- ☆578Feb 6, 2025Updated last year
- Fast protein backbone generation with SE(3) flow matching.☆328Jul 19, 2024Updated last year
- AlphaFold Meets Flow Matching for Generating Protein Ensembles☆527Mar 22, 2026Updated 2 months ago
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆192Jun 24, 2024Updated last year
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- Sidechain conditioning and modeling for full-atom protein sequence design☆138Nov 11, 2025Updated 6 months ago
- ☆47Sep 16, 2024Updated last year
- Diffusion models of protein structure; trigonometry and attention are all you need!☆568Dec 12, 2023Updated 2 years ago
- User friendly and accurate binder design pipeline☆1,096May 11, 2026Updated last week
- ☆98Oct 14, 2025Updated 7 months ago
- ☆118Dec 7, 2022Updated 3 years ago
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆90Jun 23, 2024Updated last year
- Protein-ligand structure prediction☆240Jul 31, 2025Updated 9 months ago
- ☆65Sep 14, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- FoldFlow: SE(3)-Stochastic Flow Matching for Protein Backbone Generation☆286Dec 10, 2024Updated last year
- ☆494Mar 5, 2026Updated 2 months ago
- Aligning protein generative models with experimental fitness☆121Mar 12, 2026Updated 2 months ago
- Geometric deep learning method to predict protein binding interfaces from a protein structure.☆159Oct 11, 2023Updated 2 years ago
- ☆92Sep 25, 2024Updated last year
- Official repository for DiffPepBuilder and DiffPepDock tools☆128Oct 24, 2025Updated 7 months ago
- Predict multiple protein conformations using sequence clustering and AlphaFold2.☆185Oct 7, 2025Updated 7 months ago