OpenProteinAI / PoETLinks
Inference code for PoET: A generative model of protein families as sequences-of-sequences
☆78Updated last year
Alternatives and similar repositories for PoET
Users that are interested in PoET are comparing it to the libraries listed below
Sorting:
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆114Updated 4 months ago
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆69Updated 3 weeks ago
- Efficient implementatin of ESM family.☆58Updated 5 months ago
- Aligning protein generative models with experimental fitness☆99Updated 2 months ago
- PLM based active learning model for protein engineering☆82Updated 11 months ago
- ☆66Updated 3 years ago
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆62Updated 5 months ago
- Protein Design by Machine Learning guided Directed Evolution☆43Updated 3 months ago
- Directed evolution of proteins in sequence space with gradients☆86Updated 11 months ago
- ☆58Updated 8 months ago
- ☆109Updated last year
- Fitness landscapes for antibodies☆72Updated 6 months ago
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆57Updated 3 months ago
- Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape☆29Updated 10 months ago
- Fast deep learning methods for large-scale protein-protein interaction screening☆46Updated 2 months ago
- Public repository describing training and testing of AntiBERTa.☆59Updated 2 years ago
- ☆60Updated last year
- Official repository of EnzymeFlow☆91Updated 7 months ago
- ☆81Updated last month
- Improved antibody structure-based design using inverse folding☆127Updated 2 months ago
- ☆41Updated 6 months ago
- ☆35Updated last year
- Python bindings for the TM-align algorithm and code for protein structure comparison developed by Zhang et al.☆56Updated 7 months ago
- An open-source deep learning framework for data mining of protein-protein interfaces or single-residue variants.☆52Updated 6 months ago
- Gibbs sampling for generating protein sequences☆56Updated 6 months ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆56Updated 3 weeks ago
- RNA Multiple Sequence Alignment☆43Updated last year
- ☆104Updated last month
- Dataset and package for working with protein-protein interactions in 3D☆94Updated 2 months ago
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆63Updated 5 months ago