OpenProteinAI / PoET
Inference code for PoET: A generative model of protein families as sequences-of-sequences
☆69Updated 10 months ago
Alternatives and similar repositories for PoET:
Users that are interested in PoET are comparing it to the libraries listed below
- Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"☆106Updated last week
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆69Updated 2 months ago
- Aligning protein generative models with experimental fitness☆88Updated 5 months ago
- ☆61Updated 3 years ago
- Efficient implementatin of ESM family.☆53Updated last month
- Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)☆53Updated last week
- Public repository describing training and testing of AntiBERTa.☆58Updated last year
- Contrastive fitness learning: Reprogramming protein language models for low-N learning of protein fitness landscape☆28Updated 7 months ago
- AlphaBind code + model accompanying pre-print☆48Updated 3 months ago
- Fitness landscapes for antibodies☆66Updated 2 months ago
- Official repository of EnzymeFlow☆82Updated 3 months ago
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆71Updated 2 weeks ago
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆67Updated 4 months ago
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆53Updated last month
- PLM based active learning model for protein engineering☆74Updated 7 months ago
- Protein language model trained on coding DNA☆46Updated 5 months ago
- Making Protein Modeling Accessible to All Biologists☆102Updated this week
- ☆56Updated 11 months ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆112Updated 3 months ago
- Zero-shot prediction of mutation effects on protein function with multimodal deep representation learning☆53Updated 9 months ago
- ☆88Updated 4 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆42Updated 4 months ago
- Improved antibody structure-based design using inverse folding☆99Updated last week
- Structure-conditioned masked language modeling for protein sequence design☆62Updated last year
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆51Updated last month
- ☆100Updated 2 years ago
- ☆74Updated last week
- A compilation of deep learning methods for protein design☆97Updated 2 years ago
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆88Updated 7 months ago
- A dataset for training and benchmarking deep learning models for RNA structure prediction☆45Updated 3 months ago