Kuhlman-Lab / evoproLinks
☆88Updated 2 weeks ago
Alternatives and similar repositories for evopro
Users that are interested in evopro are comparing it to the libraries listed below
Sorting:
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆68Updated 3 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆66Updated 3 months ago
- code for IDR binding paper 2025☆56Updated 8 months ago
- ☆62Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆70Updated this week
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆76Updated 2 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆70Updated last year
- Sidechain conditioning and modeling for full-atom protein sequence design☆124Updated 4 months ago
- Efficient manipulation of protein structures in Python☆58Updated last month
- AlphaBind code + model accompanying pre-print☆83Updated 3 months ago
- ☆78Updated 8 months ago
- ☆72Updated 4 months ago
- Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling☆104Updated 3 weeks ago
- Graphinity: Equivariant Graph Neural Network Architecture for Predicting Change in Antibody-Antigen Binding Affinity☆51Updated 3 months ago
- Scripts to run AlphaFold3, Boltz-1 and Chai-1 with MMseqs2 MSAs and custom templates.☆94Updated last month
- ☆44Updated last year
- ☆71Updated 7 months ago
- AlphaFold-initiated replica exchange protein docking☆84Updated 4 months ago
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆45Updated 11 months ago
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆91Updated last month
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆128Updated 6 months ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆60Updated 2 years ago
- ☆47Updated 9 months ago
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆34Updated last month
- Official repository for DiffPepBuilder and DiffPepDock tools☆107Updated this week
- ☆116Updated 4 months ago
- Utility for building inverse rotamer assemblies out of a Rosetta matcher/enzdes constraint file.☆25Updated 7 months ago
- ☆48Updated 4 months ago
- Extension of ThermoMPNN for double mutant predictions☆43Updated 3 weeks ago
- A bunch of shell utilities for dealing the silent files☆68Updated 3 weeks ago