Alternatives and similar repositories for _2024_cagiada_stability:

Users that are interested in _2024_cagiada_stability are comparing it to the libraries listed below

• LBM-EPFL / CARBonAra
  Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…
  ☆39Updated 5 months ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆56Updated 2 months ago
• bene837 / af2seq
  ☆43Updated 7 months ago
• Kuhlman-Lab / evopro
  ☆76Updated last month
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆50Updated 5 months ago
• AbSciBio / igdesign
  ☆38Updated 3 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆34Updated 7 months ago
• data2code / afpdb
  Efficient manipulation of protein structures in Python
  ☆53Updated 6 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆46Updated 4 months ago
• GMdSilva / gms_natcomms_1705932980_data
  Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2
  ☆39Updated 11 months ago
• gitter-lab / metl
  Mutational Effect Transfer Learning (METL) framework for pretraining and finetuning biophysics-informed protein language models
  ☆35Updated 3 weeks ago
• beckham-lab / EpHod
  Machine learning prediction of enzyme optimum pH
  ☆33Updated this week
• pengzhangzhi / ab_opt
  Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.
  ☆58Updated last year
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆69Updated 3 months ago
• adaptyvbio / competition_metrics
  Metrics for our protein design competitions.
  ☆27Updated 6 months ago
• dina-lab3D / CombFold
  ☆81Updated 7 months ago
• meilerlab / HyperMPNN
  HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles
  ☆54Updated 2 months ago
• ELELAB / RosettaDDGPrediction
  ☆65Updated 2 months ago
• ShenLab / SeqDance
  code for SeqDance/ESMDance, biophysics-informed protein language models
  ☆34Updated last month
• Kuhlman-Lab / ThermoMPNN-D
  Extension of ThermoMPNN for double mutant predictions
  ☆32Updated last month
• patrickbryant1 / Cfold
  Structure prediction of alternative protein conformations
  ☆75Updated 2 months ago
• TencentAI4S / HuDiff
  Code for humanization of antibody and nanobody
  ☆39Updated 5 months ago
• rigdenlab / ABCFold
  Scripts to run AlphaFold3, Boltz-1 and Chai-1 with MMseqs2 MSAs and custom templates.
  ☆70Updated this week
• clami66 / AF_unmasked
  Source code and examples for AlphaFold Unmasked
  ☆62Updated 2 weeks ago
• bwicky / oligomer_hallucination
  ☆35Updated last year
• oxpig / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆27Updated 8 months ago
• jonfunk21 / ProteusAI
  ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…
  ☆53Updated 2 months ago
• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆29Updated 10 months ago
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆38Updated 5 months ago
• Kuhlman-Lab / alphafold3
  Kuhlman Lab Installation of AlphaFold3
  ☆25Updated last month