Utility for building inverse rotamer assemblies out of a Rosetta matcher/enzdes constraint file.
☆27Mar 8, 2025Updated last year
Alternatives and similar repositories for invrotzyme
Users that are interested in invrotzyme are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PLACER is graph neural network for local prediction of protein-ligand conformational ensembles.☆248Nov 5, 2025Updated 6 months ago
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆90Dec 3, 2025Updated 5 months ago
- Small_molecule_binder_design_use_pseudocycles☆25Nov 19, 2024Updated last year
- ☆150Jul 16, 2025Updated 10 months ago
- Utility scripts to generate and evaluate parametrically guided beta barrel protein backbone structures.☆14Nov 14, 2025Updated 6 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Graphormer Based Protein Sequence Design☆26Feb 2, 2024Updated 2 years ago
- GRACE: Generative Renaissance in Artificial Computational Enzyme Design☆19Jan 8, 2025Updated last year
- ☆76May 4, 2026Updated 3 weeks ago
- Public RFDiffusionAA repo☆482Jul 9, 2024Updated last year
- ☆23Jun 10, 2025Updated 11 months ago
- Inference code for RFdiffusion2☆425Apr 3, 2026Updated last month
- ☆22Dec 20, 2024Updated last year
- ☆578Feb 6, 2025Updated last year
- ☆69Apr 8, 2025Updated last year
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- ☆34Mar 2, 2026Updated 2 months ago
- Sidechain conditioning and modeling for full-atom protein sequence design☆138Nov 11, 2025Updated 6 months ago
- A simple but powerful VSCode extension for visualizing protein structures using the Molstar framework.☆35Oct 17, 2025Updated 7 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆75Jul 2, 2025Updated 10 months ago
- Directed evolution of proteins in sequence space with gradients☆96Oct 18, 2025Updated 7 months ago
- ProteinDesign with RFdiffusion and ProteinMPNN/LigandMPNN☆23Mar 6, 2025Updated last year
- Official repository of EnzymeFlow☆101Dec 7, 2024Updated last year
- Explore protein fold space with deep generative models☆16Aug 5, 2024Updated last year
- MaSIF-neosurf: surface-based protein design for ternary complexes.☆174Feb 6, 2026Updated 3 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆38Dec 21, 2023Updated 2 years ago
- Efficient manipulation of protein structures in Python☆68Sep 27, 2025Updated 8 months ago
- Structure-conditioned masked language modeling for protein sequence design☆74Jan 31, 2024Updated 2 years ago
- Metrics to evaluate distributional coverage of generative models of protein structures.☆21Aug 13, 2025Updated 9 months ago
- ☆33Feb 5, 2025Updated last year
- Machine Learning models for in vitro enzyme kinetic parameter prediction☆87Apr 19, 2026Updated last month
- Making Protein Language Modeling Accessible to All Biologists☆164May 21, 2026Updated last week
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆72Feb 21, 2026Updated 3 months ago
- ☆404Aug 7, 2024Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Code for designing binders to flexible peptides with AlphaFold2 Hallucination☆30Dec 21, 2023Updated 2 years ago
- All-atom inverse protein folding through discrete flow matching (ICML2025)☆32Mar 22, 2026Updated 2 months ago
- Code for designing biased protein states☆81Apr 15, 2026Updated last month
- Gibbs sampling for generating protein sequences☆58Jan 17, 2025Updated last year
- ☆494Mar 5, 2026Updated 2 months ago
- Protein structure diffusion model for unconditional protein generation and motif scaffolding☆192Jun 24, 2024Updated last year
- A standardized protein design benchmark for motif-scaffolding problems☆79Jan 27, 2026Updated 4 months ago