data2code / afpdbLinks
Efficient manipulation of protein structures in Python
☆55Updated 9 months ago
Alternatives and similar repositories for afpdb
Users that are interested in afpdb are comparing it to the libraries listed below
Sorting:
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆65Updated last month
- Metrics for our protein design competitions.☆35Updated 9 months ago
- ☆70Updated 5 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆68Updated last year
- ☆86Updated last month
- code for IDR binding paper 2025☆47Updated 6 months ago
- ☆44Updated 11 months ago
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆48Updated last year
- Active Learning-Assisted Directed Evolution for Protein Engineering☆65Updated 9 months ago
- ☆85Updated 11 months ago
- Extension of ThermoMPNN for double mutant predictions☆42Updated 3 weeks ago
- PyDock Tutorial☆33Updated 7 years ago
- Structure prediction of alternative protein conformations☆77Updated 6 months ago
- ☆51Updated 2 weeks ago
- ☆61Updated last year
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆61Updated 6 months ago
- AlphaFold-initiated replica exchange protein docking☆84Updated 2 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆51Updated 3 months ago
- ☆39Updated last year
- Kuhlman Lab Installation of AlphaFold3☆30Updated 3 months ago
- ☆46Updated 7 months ago
- A Unified Approach to Protein Engineering☆42Updated last year
- ☆38Updated 11 months ago
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- Generating and scoring novel enzyme sequences with a variety of models and metrics☆70Updated 2 months ago
- ☆33Updated 4 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆63Updated last year
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆44Updated 9 months ago
- Scoring function for interprotein interactions in AlphaFold2 and AlphaFold3☆83Updated 4 months ago