data2code / afpdbLinks
Efficient manipulation of protein structures in Python
☆61Updated 4 months ago
Alternatives and similar repositories for afpdb
Users that are interested in afpdb are comparing it to the libraries listed below
Sorting:
- ☆94Updated 3 months ago
- ☆47Updated last year
- ☆73Updated 10 months ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Updated last year
- Extension of ThermoMPNN for double mutant predictions☆53Updated 3 months ago
- ☆43Updated 2 years ago
- ☆91Updated last year
- AlphaFold-initiated replica exchange protein docking☆87Updated 8 months ago
- Metrics for our protein design competitions.☆35Updated last year
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆50Updated last year
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆93Updated last month
- ☆56Updated 5 months ago
- Source code and examples for AlphaFold Unmasked☆76Updated 2 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆78Updated 3 months ago
- ☆61Updated last year
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆119Updated 2 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆43Updated last year
- Structure prediction of alternative protein conformations☆80Updated 11 months ago
- Official repository for the ProteinDJ protein design pipeline☆84Updated 2 weeks ago
- Scripts to run AlphaFold3, Boltz-1 and Chai-1 with MMseqs2 MSAs and custom templates.☆101Updated last week
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆70Updated 7 months ago
- code for IDR binding paper 2025☆67Updated 11 months ago
- Kuhlman Lab Installation of AlphaFold3☆38Updated 4 months ago
- Making Protein folding accessible to all!☆25Updated 2 years ago
- PyDock Tutorial☆35Updated 7 years ago
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆98Updated 2 years ago
- Code for running BinderFlow☆57Updated 2 months ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆71Updated last year
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆64Updated last month
- Deep learning framework for protein sequence design from a backbone scaffold that can leverage the molecular context including non-protei…☆47Updated 3 months ago