data2code / afpdbLinks
Efficient manipulation of protein structures in Python
☆60Updated last month
Alternatives and similar repositories for afpdb
Users that are interested in afpdb are comparing it to the libraries listed below
Sorting:
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆70Updated last year
- ☆44Updated last year
- ☆90Updated last month
- ☆41Updated last year
- Extension of ThermoMPNN for double mutant predictions☆46Updated last month
- Metrics for our protein design competitions.☆35Updated last year
- Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations☆77Updated 4 months ago
- ☆88Updated last year
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆57Updated 5 months ago
- ☆62Updated last year
- ☆71Updated 7 months ago
- code for IDR binding paper 2025☆59Updated 9 months ago
- Active Learning-Assisted Directed Evolution for Protein Engineering☆70Updated 3 weeks ago
- Modelling protein conformational landscape with Alphafold☆54Updated 2 months ago
- BindCraft modified to make PyRosetta use and installation optional: no license needed☆96Updated last month
- Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks☆32Updated last year
- AlphaFold-initiated replica exchange protein docking☆84Updated 5 months ago
- ProtFlow Implementation of the RiffDiff pipeline to design enzymes from theozymes.☆37Updated last week
- PyDock Tutorial☆34Updated 7 years ago
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆64Updated 2 months ago
- DDGScan: an integrated parallel workflow for the in silico point mutation scan of protein☆49Updated last year
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 4 months ago
- ☆54Updated 3 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆39Updated last year
- Structure prediction of alternative protein conformations☆80Updated 8 months ago
- ☆49Updated 4 months ago
- ☆52Updated 4 months ago
- TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.☆65Updated last year
- Analysis of alphafold and colabfold results☆32Updated last month
- Physical energy function for protein sequence design☆33Updated 2 years ago