data2code / afpdb

Related projects ⓘ

Alternatives and complementary repositories for afpdb

• Kuhlman-Lab / evopro
  ☆70Updated 7 months ago
• seanrjohnson / protein_scoring
  Generating and scoring novel enzyme sequences with a variety of models and metrics
  ☆62Updated 4 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆46Updated 5 months ago
• kWeissenow / EMBER3D
  Ultra-fast in-silico structure mutation
  ☆32Updated last year
• bene837 / af2seq
  ☆38Updated 2 months ago
• Graylab / AlphaRED
  AlphaFold-initiated replica exchange protein docking
  ☆45Updated 3 months ago
• KULL-Centre / _2023_Blaabjerg_SSEmb
  ☆22Updated 2 months ago
• A-Alpha-Bio / alphabind
  AlphaBind code + model accompanying pre-print
  ☆28Updated last week
• jonfunk21 / ProteusAI
  ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…
  ☆35Updated this week
• dina-lab3D / CombFold
  ☆74Updated 2 months ago
• AspirinCode / AlphaPPImd
  Exploring the conformational ensembles of protein-protein complexes with transformer-based generative neural networks
  ☆25Updated 5 months ago
• hesther / enzymemap
  Python package to atom map, correct and suggest enzymatic reactions
  ☆35Updated 7 months ago
• psipred / Merizo
  Fast and accurate protein domain segmentation using Invariant Point Attention
  ☆26Updated 3 weeks ago
• Wublab / Pythia
  Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutations
  ☆25Updated 2 months ago
• PeptoneLtd / proteinmpnn_ddg
  Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.
  ☆33Updated 2 months ago
• ievapudz / TemStaPro
  TemStaPro - a program for protein thermostability prediction using sequence representations from a protein language model.
  ☆48Updated 7 months ago
• KULL-Centre / _2024_cagiada_stability
  ☆45Updated last month
• oxpig / AbLang2
  An antibody-specific language model focusing on NGL prediction
  ☆21Updated 3 months ago
• brianjimenez / pydock_tutorial
  PyDock Tutorial
  ☆30Updated 6 years ago
• coreyhowe999 / RSO
  ☆17Updated 3 weeks ago
• CongLabCode / RoseTTAFold2-PPI
  Fast deep learning methods for large-scale protein-protein interaction screening
  ☆24Updated last month
• ELELAB / RosettaDDGPrediction
  ☆48Updated 9 months ago
• flyark / AFM-LIS
  Local Interaction Score (LIS) Calculation from AlphaFold-Multimer (Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer)
  ☆43Updated 2 months ago
• PKUliujl / GeoSeqBuilder
  ☆20Updated last month
• dina-lab3D / NanoNet
  ☆43Updated last year
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆32Updated 11 months ago
• programmablebio / pepmlm
  Target Sequence-Conditioned Generation of Peptide Binders via Masked Language Modeling
  ☆42Updated 3 months ago
• fteufel / alphafold-peptide-receptors
  Identifying peptide-receptor interactions using AlphaFold-Multimer
  ☆24Updated last year
• patrickbryant1 / Cfold
  Structure prediction of alternative protein conformations
  ☆71Updated 2 months ago
• jsunn-y / ALDE
  Active Learning-Assisted Directed Evolution for Protein Engineering
  ☆25Updated this week