brianhie / efficient-evolutionLinks
Efficient evolution from protein language models
☆220Updated 2 years ago
Alternatives and similar repositories for efficient-evolution
Users that are interested in efficient-evolution are comparing it to the libraries listed below
Sorting:
- Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions☆170Updated 2 years ago
- Antibody Numbering and Antigen Receptor ClassIfication☆260Updated last year
- Predict the structure of immune receptor proteins☆170Updated 2 months ago
- BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…☆225Updated 8 months ago
- A machine-learning package for navigating combinatorial protein fitness landscapes.☆133Updated 4 years ago
- Tutorials, cheat sheets, and other resources for computational methods for protein design.☆131Updated 2 years ago
- Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.☆167Updated 3 years ago
- ☆122Updated last year
- AbLang: A language model for antibodies☆157Updated 2 years ago
- Code for ColabDock paper☆151Updated 9 months ago
- Convenience Python APIs for antibody numbering using ANARCI☆115Updated 8 months ago
- Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.☆168Updated last year
- Joint sequence and structure generation with RoseTTAFold sequence space diffusion☆326Updated last year
- Bilingual Language Model for Protein Sequence and Structure☆297Updated last year
- Fitness landscapes for antibodies☆146Updated last month
- trRosetta for protein design☆183Updated 4 years ago
- In silico directed evolution of peptide binders with AlphaFold☆261Updated last month
- Evolutionary couplings from protein and RNA sequence alignments☆296Updated 3 months ago
- Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins☆173Updated 9 months ago
- ☆432Updated last week
- open source code for Tencent tFold☆142Updated 10 months ago
- Unconstrained lattice antibody-antigen bindings generator☆111Updated 2 months ago
- Rifdock Library for Conformational Search☆166Updated last year
- ☆207Updated 9 months ago
- ☆255Updated last year
- Finetuning ProGen2 protein language model for generation of protein sequences from selected protein families.☆86Updated last year
- Public repository describing training and testing of AntiBERTa.☆61Updated 2 years ago
- A collection of *fold* tools☆302Updated 5 months ago
- Protein hallucination and inpainting with RoseTTAFold☆277Updated 2 years ago
- This is the offical codebase to reproduce and use EVOLVEpro, a model for in silico directed evolution of protein activities using few-sho…☆329Updated 7 months ago