LHG-GG / I002CLinks
Telomere-to-Telomere diploid Indian Genome
☆14Updated this week
Alternatives and similar repositories for I002C
Users that are interested in I002C are comparing it to the libraries listed below
Sorting:
- somatic SV calling on matched tumor-normal co-assembly graphs☆22Updated last year
- General purpose utility related to GAF files☆29Updated 2 weeks ago
- Phased structural variant discovery in pangenomes☆39Updated 2 months ago
- ☆22Updated last month
- ☆19Updated last year
- Genome Assembly 102☆17Updated 9 months ago
- R package and wrapper functions for identifying serial structural variations from genome assemblies☆29Updated last year
- Convert HAL to VG☆23Updated last year
- Phasing reads with secondary alignments☆21Updated last year
- Centromere mapping and annotation pipeline☆22Updated this week
- A web-based, interactive pangenome visualization tool☆21Updated 2 years ago
- A module for improving the insertion sequences of structural variant calls☆33Updated 4 years ago
- De novo tandem repeat calling from PacBio HiFi data☆19Updated 2 months ago
- ☆29Updated 2 years ago
- Long read aligner for cyclic and acyclic pangenome graphs☆40Updated 2 years ago
- Genotyping of copy number sensitive allele-specific haplotypes☆27Updated 3 months ago
- Kmer Analysis of Pileups for Genotyping☆35Updated 2 weeks ago
- Tandem repeat genotyping with long reads☆35Updated 4 months ago
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆47Updated 5 months ago
- Improved long-read assembly by preserving contained reads☆30Updated last year
- Repeat and haplotype aware error correction in nanopore sequencing reads with DeChat☆25Updated 9 months ago
- MEMO: MEM-based pangenome indexing for k-mer queries☆20Updated last year
- Programs implementing the trio-binning genome assembly method☆21Updated 2 years ago
- recompute GFA link overlaps☆25Updated 3 years ago
- Tandem Repeats Finder: a program to analyze DNA sequences☆19Updated 6 months ago
- Linear-time de novo Long Read Assembler☆41Updated 3 months ago
- Differential k-mer analysis☆40Updated 2 years ago
- use variant nesting information to flter overlapping sites from vg deconstruct output☆31Updated 8 months ago
- ULTRA Locates Tandemly Repetitive Areas☆41Updated 3 months ago
- Dividing heterogeneous long-read sequencing into groups with de Bruijn graphs☆41Updated 4 months ago