seryrzu / unialignerLinks
☆66Updated last year
Alternatives and similar repositories for unialigner
Users that are interested in unialigner are comparing it to the libraries listed below
Sorting:
- VACmap: a long-read aligner specifically designed for complex structural variation discovery☆36Updated last week
- MarginPolish: Graph based assembly polishing☆47Updated 4 years ago
- Efficient low-divergence mapping of long reads in minimizer space☆68Updated 2 years ago
- Alignment-free genotyper for SNPs and short indels, implemented in Python.☆52Updated 8 months ago
- Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)☆46Updated 2 months ago
- ☆38Updated 2 years ago
- ☆67Updated 2 weeks ago
- A Nextflow workflow to generate lift over files for any pair of genomes☆69Updated 5 months ago
- A battery of methylation tools for PacBio HiFi reads☆43Updated last week
- Correcting errors in noisy long reads using variation graphs☆50Updated 3 years ago
- Identify long STRs, VNTRs, satellite DNA and other low-complexity regions in a genome☆81Updated this week
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆50Updated last week
- Exact Tandem Repeat Finder (not a TRF replacement)☆50Updated 6 years ago
- Joint structural variant and copy number variant caller for HiFi sequencing data☆64Updated 2 weeks ago
- Show pangenome graphs in an easy way☆56Updated 3 months ago
- ☆31Updated 6 months ago
- Pan-Genomic Matching Statistics☆54Updated last year
- Dashing 2 is a fast toolkit for k-mer and minimizer encoding, sketching, comparison, and indexing.☆68Updated last year
- ☆78Updated 5 years ago
- VNTR annotation using motif selection☆39Updated 2 months ago
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆47Updated 4 years ago
- ☆35Updated 9 months ago
- Banded Striped DNA Sequence Alignment☆48Updated 2 years ago
- Graphical interactive tool for the visualization of sequence graphs in GFA format.☆71Updated 6 years ago
- A local-haplotagging-based small and structural variant caller☆89Updated last week
- Evaluate variant calls and its combination with k-mer multiplicity☆67Updated 2 years ago
- A reimplementation of the WaveFront Alignment algorithm at low memory☆50Updated last year
- Call select base modifications in PacBio HiFi reads☆15Updated last week
- ☆36Updated 3 months ago
- A C++ library and utilities for manipulating the Graphical Fragment Assembly format.☆55Updated 3 years ago