fork of dorado that supports S/BLOW5
☆12Jan 8, 2026Updated 2 months ago
Alternatives and similar repositories for slow5-dorado
Users that are interested in slow5-dorado are comparing it to the libraries listed below
Sorting:
- A simple toolkit for manipulating nanopore signal data☆19Sep 24, 2024Updated last year
- ☆27Nov 14, 2025Updated 3 months ago
- Predictive kmer models for development use☆63Jun 6, 2023Updated 2 years ago
- Two pass alignment for long reads☆22Mar 9, 2021Updated 5 years ago
- ☆10Mar 11, 2025Updated 11 months ago
- MethPhaser: methylation-based haplotype phasing of human genomes☆54Mar 5, 2025Updated last year
- ☆12Nov 18, 2024Updated last year
- Functions to extract information from Oxford Nanopore sequencing data and alignments☆11Dec 4, 2025Updated 3 months ago
- DNA methylation analysis downstream to Nanopolish for Oxford Nanopore DNA sequencing datasets☆30Jul 3, 2023Updated 2 years ago
- Telomere-to-Telomere diploid Indian Genome☆14Feb 11, 2026Updated 3 weeks ago
- Ultra-fast methylation calling and event alignment tool for nanopore sequencing data (supports CUDA acceleration)☆161Jan 29, 2026Updated last month
- NanoReviser: An Error-correction Tool for Nanopore Sequencing Based on a Deep Learning Algorithm☆28May 9, 2024Updated last year
- DeepMP is a computational tool to detect DNA modifications in Nanopore sequencing data☆28Mar 18, 2022Updated 3 years ago
- A tool for sniffing out the differences in vari-Ants☆38Jan 28, 2026Updated last month
- snapper☆13Jul 8, 2024Updated last year
- SingleCell Nanopore sequencing data analysis☆64May 30, 2025Updated 9 months ago
- "nanoCEM" is a simple tool designed to visualize the features that distinguish between two groups of ONT data at the site level.☆17Oct 13, 2025Updated 4 months ago
- A streaming method for mapping nanopore raw signals☆32Nov 7, 2021Updated 4 years ago
- A wrapper for calling small variants from human germline high-coverage single-sample Illumina data☆14Jul 21, 2019Updated 6 years ago
- tandem repeat finding from erroneous long reads☆15Aug 4, 2025Updated 7 months ago
- Slow5tools is a toolkit for converting (FAST5 <-> SLOW5), compressing, viewing, indexing and manipulating data in SLOW5 format.☆103Jan 28, 2026Updated last month
- LongcallR is a SNP caller for single molecule long-read RNA-seq data☆72Dec 14, 2025Updated 2 months ago
- The buttery eel - a slow5 guppy/dorado basecaller wrapper☆42Feb 13, 2026Updated 3 weeks ago
- Detect and phase minor SNVs from long-read sequencing data☆14Dec 28, 2021Updated 4 years ago
- Reference CUDA implementation of training a small Bayesian neural network (BNN) using MCMC☆18May 28, 2021Updated 4 years ago
- R package for large-scale CNV analysis from RNA-seq☆19Dec 21, 2023Updated 2 years ago
- ☆39Apr 25, 2023Updated 2 years ago
- ELECTOR: EvaLuator of Error Correction Tools for lOng Reads☆15May 27, 2021Updated 4 years ago
- nanoNOMe (Nucleosome Occupancy and Methylome nanopore sequencing) Analysis☆20Nov 18, 2022Updated 3 years ago
- nPoRe: n-Polymer Realigner for improved pileup-based variant calling☆18Jul 11, 2022Updated 3 years ago
- BlockPolish: accurate polishing of long-read assembly via block divide-and-conquer☆17Jun 15, 2023Updated 2 years ago
- SNP genotyping in polyploids☆17Aug 12, 2020Updated 5 years ago
- Indels are not ideal - quick test for interrupted ORFs in bacterial/microbial genomes☆15Jun 26, 2018Updated 7 years ago
- BED QC tool (in the making)☆18Aug 19, 2022Updated 3 years ago
- ☆82Jan 6, 2025Updated last year
- Methylation/modified base calling separated from basecalling.☆184Sep 17, 2024Updated last year
- Small variant, structural variant, and short tandem repeat phasing tool for PacBio HiFi reads☆82Jan 20, 2026Updated last month
- Reference bias measuring toolkit☆20Apr 18, 2025Updated 10 months ago
- Snakemake workflow for Illumina RNA-sequencing experiments - extract population genomic signals from RNA-Seq data☆18Feb 17, 2026Updated 2 weeks ago