Inferring multi-modality dynamics for single cell genomics data
☆13Dec 18, 2025Updated 5 months ago
Alternatives and similar repositories for GraphVelo
Users that are interested in GraphVelo are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆30Sep 29, 2025Updated 7 months ago
- Resources for phage genomics and annotation☆10Oct 27, 2025Updated 6 months ago
- A computational tool for identification of 3D multi-modal spatial neighborhoods☆15Aug 1, 2025Updated 9 months ago
- ☆26Dec 10, 2025Updated 5 months ago
- ☆15Aug 5, 2022Updated 3 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- RegCloser is a genome gap-closing tool based on the robust regression approach, which is conceptually applicable to de novo assembly of N…☆15Apr 22, 2024Updated 2 years ago
- Non-parametric density inference for single-cell analysis.☆74Apr 10, 2026Updated last month
- inferring regulatory cellular dynamics☆112May 13, 2026Updated last week
- Telomere-to-Telomere diploid Indian Genome☆15Mar 5, 2026Updated 2 months ago
- Variational Estimation of Latent Velocity from Expression with Time-resolution☆13May 30, 2024Updated last year
- ☆33Nov 2, 2023Updated 2 years ago
- ☆11Dec 17, 2025Updated 5 months ago
- Predict RNA velocity through deep learning☆73Dec 12, 2023Updated 2 years ago
- R Interface to CVODE/CVODES/IDA functions in the SUNDIALS ODE solving C library☆11Apr 19, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- SingleCell: A Python/Cython Package for Processing Single-Cell RNA-Seq Data.☆11Jan 26, 2018Updated 8 years ago
- CHM13 human reference genome issue tracking☆20Jan 18, 2024Updated 2 years ago
- Miscellaneous tools for reproducible research with R.☆23Jul 2, 2025Updated 10 months ago
- Codes for the articles published in Towards Data Science, a journal of Medium.com☆11Jul 16, 2021Updated 4 years ago
- ☆19Aug 7, 2017Updated 8 years ago
- Julia package for learning cellular sheaf Laplacians☆17Apr 21, 2021Updated 5 years ago
- R package for simplifying general computation on simplicial complexes☆17Oct 17, 2023Updated 2 years ago
- Granular Functional Filtering (Gruffi) to isolate stressed cells☆14Nov 7, 2024Updated last year
- JTK -- a regional diploid genome assembler☆26Apr 22, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- User-friendly extensions to the Disease Ontology☆20Sep 9, 2016Updated 9 years ago
- PHOENIX: a tool to infer biologically informed NeuralODEs describing genome-wide regulatory dynamics☆20May 8, 2024Updated 2 years ago
- A python package for calculating local cell specific networks☆17Nov 17, 2023Updated 2 years ago
- ☆31Apr 9, 2022Updated 4 years ago
- Tools for assessing clustering robustness☆32Apr 2, 2026Updated last month
- Assessing the increase in power from increasing read depth in a given RNA-Seq study☆14May 13, 2019Updated 7 years ago
- A method for measuring chromosome-specific telomere length from long reads☆22May 20, 2024Updated 2 years ago
- Model and represent Simplicial Complexes and their Cochains. Provides a clean interface to calculate Betti numbers and (discrete) Hodge d…☆18Jan 30, 2025Updated last year
- ☆27May 22, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆16Mar 18, 2025Updated last year
- bioInfograph: an online tool to design and display multi-panel scientific figure interactively☆12Feb 15, 2022Updated 4 years ago
- Hierarchical Cell Annotation☆30Nov 17, 2024Updated last year
- RNA velocity validation☆22Mar 16, 2022Updated 4 years ago
- ☆30Aug 1, 2023Updated 2 years ago
- Pangenome graphs visualisation, distance computing, reconstruction of sequences and other utility functions☆36Apr 28, 2026Updated 3 weeks ago
- De novo construction of isoforms from long-read data☆36Jun 10, 2025Updated 11 months ago