An ultra-fast gzip file tools
☆28Jun 23, 2026Updated last month
Alternatives and similar repositories for MingZ
Users that are interested in MingZ are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- ☆16Apr 3, 2023Updated 3 years ago
- An ultra-fast and efficient tool for high frequency kmer sequencing reads extraction☆19Mar 6, 2024Updated 2 years ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆46May 23, 2026Updated 2 months ago
- PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files☆30Jul 16, 2026Updated last week
- Dynamic Elongation of a Genome Assembly Path☆26Apr 29, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- High throughput python tool for mining and analysis of gene duplications.☆16Mar 24, 2026Updated 4 months ago
- VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files☆59Jun 20, 2026Updated last month
- A filter algorithm with program to filter an alignment or mapping file☆12May 15, 2025Updated last year
- A tool for performing collinearity-incorporating homology inference☆34Jul 17, 2026Updated last week
- CATG (Collinearity-based Assembly correcTor GUI) is a tool that can correct genome assembly with collinearity and generate tour files for…☆18Jan 24, 2026Updated 6 months ago
- An ultra-fast and efficient genomic tool for coverage calculation☆173Jun 9, 2026Updated last month
- ☆28May 12, 2026Updated 2 months ago
- HELIANO is a software for detection and classification of Helitron-like elements.☆34Jul 13, 2026Updated last week
- A genome assembly assessment pipeline.☆39Jun 5, 2026Updated last month
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Repeat-aware polishing genomes assembled using HiFi long reads☆105Apr 7, 2026Updated 3 months ago
- HiC-Hiker: A probabilistic model to determine contig orientation in chromosome-length scaffolds with Hi-C☆26Jan 14, 2021Updated 5 years ago
- ☆15Apr 16, 2026Updated 3 months ago
- ☆29Oct 20, 2023Updated 2 years ago
- SINE annotation tool for plant genomes☆19Jan 21, 2024Updated 2 years ago
- A complete telomere-to-telomere assembly of sheep: T2T-sheep1.0☆21Nov 2, 2024Updated last year
- De novo chromosome-level scaffolding and phasing tool using Hi-C☆30Nov 23, 2025Updated 8 months ago
- ☆45Dec 11, 2025Updated 7 months ago
- Some components that speed up and reduce resource cost for original ALLHiC☆15Jun 21, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Scripts used to perform analyses in Rice et al. (2023)☆16Dec 28, 2023Updated 2 years ago
- ☆24Nov 19, 2025Updated 8 months ago
- Figures for the CHM13 T2T SD paper.☆12Sep 12, 2021Updated 4 years ago
- tomato graph pangenome☆92Dec 13, 2022Updated 3 years ago
- Annotate Olfactory receptor CDS from genome☆11Apr 29, 2023Updated 3 years ago
- ☆33Apr 7, 2025Updated last year
- Code for assembly approach presented in "Haplotype-resolved assembly of a tetraploid potato genome using long reads and low-depth offspri…☆14Nov 20, 2023Updated 2 years ago
- ☆35Jun 24, 2026Updated last month
- VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Forma…☆108Jun 20, 2026Updated last month
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Centromics: visualing centromeres with multiple omics data☆27Mar 4, 2025Updated last year
- The tools are used for displaying hic signal of genome☆26Jan 4, 2021Updated 5 years ago
- A Toolkit for analyzing next-generation DNA Re-Sequencing data☆15Feb 15, 2022Updated 4 years ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆21Jul 26, 2023Updated 2 years ago
- ☆15Jan 19, 2022Updated 4 years ago
- base-level dotplots from PAF alignments☆35Sep 18, 2025Updated 10 months ago
- Generate alternative long reads with the help of target`s assemblies, target`s PacBio HiFi reads and reference genome.☆20Mar 25, 2026Updated 3 months ago