Alternatives and similar repositories for MingZ

Users that are interested in MingZ are comparing it to the libraries listed below

• yilinZhang-bio / Watermelon-pangenome
  ☆23Updated last year
• Atvar2 / plotHicGenome
  The tools are used for displaying hic signal of genome
  ☆24Updated 4 years ago
• sc-zhang / CATG
  CATG (Collinearity-based Assembly correcTor GUI) is a tool that can correct genome assembly with collinearity and generate tour files for…
  ☆17Updated 5 months ago
• ChenHuaLab / CEGA
  Inferring natural selection by comparative population genomic analysis across species
  ☆23Updated last year
• Jianwei-Zhang / DEGAP
  Dynamic Elongation of a Genome Assembly Path
  ☆21Updated last year
• wangziwei08 / LTR-insertion-time-estimation
  ☆16Updated 2 years ago
• lardo / khaper
  ☆28Updated 3 years ago
• Chenglin20170390 / Haplotype-diversity
  This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…
  ☆30Updated 6 months ago
• zhangrengang / Centromics
  Centromics: visualing centromeres with multiple omics data
  ☆23Updated 4 months ago
• linguoliang / puzzle-hi-c
  ☆16Updated 7 months ago
• jmsong2 / GenomeSyn
  We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …
  ☆29Updated 3 years ago
• baozg / phased-assembly-check
  ☆30Updated 6 months ago
• chenym1 / genetribe
  A tool for performing collinearity-incorporating homology inference
  ☆32Updated last year
• HuiyangYu / HFKReads
  An ultra-fast and efficient tool for high frequency kmer sequencing reads extraction
  ☆19Updated last year
• legumeinfo / pandagma
  Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.
  ☆17Updated 3 weeks ago
• sc-zhang / T2Tools
  T2Tools is a toolset contains several tools for plant T2T assembly, and it is under development.
  ☆14Updated 2 months ago
• YaoZhou89 / WGSc
  ☆15Updated 3 years ago
• tangerzhang / calc_switchErr
  ☆27Updated 3 months ago
• lurebgi / BOPsexChr
  Analyses of sex chromosome evolution in songbirds
  ☆16Updated 6 years ago
• CMB-BNU / PloidyFrost
  reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph
  ☆17Updated 2 years ago
• yangli557 / AnnoSINE
  SINE annotation tool for plant genomes
  ☆17Updated last year
• phasegenomics / matlock
  Simple tools for working with Hi-C data
  ☆18Updated 6 years ago
• zhangrengang / SOI
  Robust identification of orthologous Synteny with the Orthology Index
  ☆23Updated 2 weeks ago
• simon19891216 / CentIER
  ☆34Updated this week
• Immortal2333 / Telomeres_and_Centromeres
  This is a method to find telomeres and centromeres in plants.
  ☆41Updated 2 years ago
• amsession / Kmer-based-Subgenome-Mapping
  ☆21Updated 11 months ago
• NBISweden / TransposonPSI
  TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…
  ☆13Updated 5 years ago
• Zhenlisme / heliano
  HELIANO is a software for detection and classification of Helitron-like elements.
  ☆29Updated last month
• panlab-bioinfo / Gap-Aid
  ☆12Updated 3 weeks ago
• zy-optimistic / GAEP
  A genome assembly assessment pipeline.
  ☆37Updated last year