Alternatives and similar repositories for genetribe:

Users that are interested in genetribe are comparing it to the libraries listed below

• schneebergerlab / AMPRIL-genomes
  scripts for the project of seven thaliana genomes assembly
  ☆38Updated 3 years ago
• baozg / assembly-annotation-pipeline
  Plant genome assembly and annotation pipeline using snakemake
  ☆42Updated last year
• Jianwei-Zhang / DEGAP
  Dynamic Elongation of a Genome Assembly Path
  ☆21Updated 11 months ago
• qiao-xin / Scripts_for_GB
  The code used in the manuscript titled "Gene duplication and evolution in recurring polyploidization-diploidization cycles in plants".
  ☆28Updated 4 years ago
• simon19891216 / CentIER
  ☆29Updated 7 months ago
• ShiuLab / PseudogenePipeline
  ☆40Updated last year
• amsession / Kmer-based-Subgenome-Mapping
  ☆20Updated 8 months ago
• lardo / khaper
  ☆27Updated 2 years ago
• Zhanmengtao / bin
  scripts
  ☆16Updated 6 years ago
• Chenglin20170390 / Haplotype-diversity
  This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…
  ☆28Updated 2 months ago
• liushoucheng / SPART
  a Semi-automated pipeline for assembling T2T genome
  ☆15Updated last week
• LAILAB-CAU / update-Mo17
  ☆24Updated 2 years ago
• lurebgi / BOPsexChr
  Analyses of sex chromosome evolution in songbirds
  ☆16Updated 5 years ago
• yywyaoyaowu / SolEvo_PotatoDele
  Use hifi to assembly the Sol genome, and dissecting Sol evo
  ☆17Updated last year
• zhangrengang / Centromics
  Centromics: visualing centromeres with multiple omics data
  ☆22Updated last month
• Immortal2333 / Telomeres_and_Centromeres
  This is a method to find telomeres and centromeres in plants.
  ☆40Updated last year
• yilinZhang-bio / Watermelon-pangenome
  ☆21Updated last year
• jkimlab / DESCHRAMBLER
  ☆22Updated last year
• baozg / phased-assembly-check
  ☆29Updated 3 months ago
• Adamtaranto / TRF2GFF
  Convert Tandem Repeat Finder dat file output into gff3 format
  ☆27Updated 3 months ago
• Yandell-Lab / maker
  Genome Annotation Pipeline
  ☆35Updated 7 months ago
• wjian8 / psvcp_v1.01
  Pan-genome Construction and Population Structure Variation Calling pipeline
  ☆38Updated 7 months ago
• SunPengChuan / wgdi-example
  ☆16Updated 4 months ago
• Farre-lab / syntenyPlotteR
  R package to draw syntenic plots in 3 different styles
  ☆40Updated last year
• obenno / ShinySyn
  A shiny application to visualize MCscan result
  ☆36Updated 2 years ago
• tangerzhang / calc_switchErr
  ☆27Updated last week
• yanyew / SynGAP
  ☆32Updated 5 months ago
• LQHHHHH / paml-yn00-run-pipeline
  A personal pipeline to calculate Ka,Ks and Ka/Ks using PAML-yn00 with YN method
  ☆9Updated last month
• JM-SONG / GenomeSyn
  ☆25Updated 3 years ago
• CMB-BNU / PloidyFrost
  reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph
  ☆16Updated last year