a tool to evaluate long-read error correction mainly with PacBio High-Fidelity Reads (HiFi reads).
☆20Dec 5, 2023Updated 2 years ago
Alternatives and similar repositories for hifieval
Users that are interested in hifieval are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A filter algorithm with program to filter an alignment or mapping file☆12May 15, 2025Updated last year
- ☆18Jan 29, 2025Updated last year
- T2Tools is a toolset contains several tools for T2T assembly, and it is under development.☆17Sep 17, 2025Updated 10 months ago
- ☆15Jan 19, 2022Updated 4 years ago
- RegCloser is a genome gap-closing tool based on the robust regression approach, which is conceptually applicable to de novo assembly of N…☆16Apr 22, 2024Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆15Feb 1, 2023Updated 3 years ago
- ☆33Jan 3, 2025Updated last year
- pangenome analyses for complete genomes of great apes (and gibbon)☆20Oct 12, 2024Updated last year
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆40Oct 29, 2025Updated 8 months ago
- base-level dotplots from PAF alignments☆35Sep 18, 2025Updated 10 months ago
- Reduce genome assembly redundancy using shared mapped k-mer method.☆15Apr 28, 2025Updated last year
- Tandem Repeats Finder: a program to analyze DNA sequences☆23Jul 30, 2025Updated 11 months ago
- A genome-scale, fast, and precise segmental duplications mapping tool☆36Sep 11, 2024Updated last year
- Construct and Analyze the North American Vitis pangenome☆29Aug 19, 2025Updated 11 months ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- zgtools: A pipeline that allows for the convenient acquisition of T2T (Telomere-to-Telomere) genomes.☆17Jul 17, 2026Updated last week
- ☆16Apr 3, 2023Updated 3 years ago
- A machine learning approach to alignment filtering☆16Jun 18, 2026Updated last month
- ☆29Jul 16, 2022Updated 4 years ago
- Consensus genome annotation using OMA☆32Jan 14, 2026Updated 6 months ago
- ☆27Jul 15, 2026Updated last week
- Simple tools for working with Hi-C data☆20Dec 19, 2018Updated 7 years ago
- Study of TE evolution in a population of genomes☆10Dec 11, 2023Updated 2 years ago
- Hybrid error correction approach for long reads using overlap graph☆11Sep 26, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆33Apr 7, 2025Updated last year
- ☆45Dec 11, 2025Updated 7 months ago
- Dynamic Elongation of a Genome Assembly Path☆26Apr 29, 2026Updated 2 months ago
- Genome Assembly Validation via Inter-SUNK distances in ONT reads☆16Feb 20, 2023Updated 3 years ago
- The tools are used for displaying hic signal of genome☆26Jan 4, 2021Updated 5 years ago
- Extracting paths from assembly graphs