hwc2021 / GSAT
Graph-based Sequence Assembly Toolkit
☆20Updated 6 months ago
Related projects ⓘ
Alternatives and complementary repositories for GSAT
- An efficient assembly tool for plant mitochondrial genome☆28Updated 5 months ago
- A tool for plotting CAFE5 gene family expansion/contraction result☆26Updated last year
- Resistify is a command line program that identifies and classifies NLRs from protein sequences☆26Updated this week
- This is a method to find telomeres and centromeres in plants.☆37Updated last year
- DNA序列比对结果 可视化展示工具☆43Updated last year
- fastHaN is a fast and scalable program for constructing haplotype networks for large samples☆12Updated 9 months ago
- Multi-level visualization of genomic statistical variables on rectangular chromosomes☆35Updated 4 months ago
- High-precision TE Annotator☆65Updated last week
- A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads☆36Updated 4 months ago
- Instruction and scripts for reconstructing ancestral genome from pairwise syntenic blocks using MLGO☆13Updated 6 years ago
- A novel genome assembly pipeline based on deep learning☆53Updated last month
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆17Updated 10 months ago
- ☆16Updated 2 years ago
- AlleleFinder is a tool for identifying allele genes from polyploid genome.☆22Updated 3 weeks ago
- A Toolkit for analyzing next-generation DNA Re-Sequencing data☆13Updated 2 years ago
- zgtools: A pipeline that allows for the convenient acquisition of T2T (Telomere-to-Telomere) genomes.☆25Updated this week
- Genome haplotype assembly and assessment method☆11Updated 11 months ago
- HiCAT new project☆27Updated 11 months ago
- A collection of scripts for working with Hi-C data, Juicebox, and other genomic file formats☆63Updated 3 years ago
- Here, we sequence and de novo assemble chromosome-scale genomes of nine wild species and two cultivated accessions of tomato and construc…☆47Updated 5 months ago
- ☆41Updated 10 months ago
- Pan-genome Construction and Population Structure Variation Calling pipeline☆33Updated 2 months ago
- ☆21Updated 2 years ago
- ☆16Updated 2 years ago
- NLR-Annotator upload☆60Updated last year
- ☆18Updated last year
- A shiny application to visualize MCscan result☆33Updated 2 years ago
- ☆28Updated 2 months ago
- A tool for quick and accurate calculation of syntenic diversity.☆29Updated 2 months ago
- A new simple and efficient software to PCA and Cluster For popolation VCF File☆61Updated 6 months ago