hwc2021 / GSATLinks
Graph-based Sequence Assembly Toolkit
☆22Updated last year
Alternatives and similar repositories for GSAT
Users that are interested in GSAT are comparing it to the libraries listed below
Sorting:
- a Semi-automated pipeline for assembling T2T genome☆24Updated last month
- Dynamic Elongation of a Genome Assembly Path☆22Updated last year
- An efficient assembly tool for plant mitochondrial genome☆65Updated last year
- Instruction and scripts for reconstructing ancestral genome from pairwise syntenic blocks using MLGO☆13Updated 7 years ago
- a gap-filling tools of genome in complex region.☆21Updated 3 months ago
- ☆41Updated 2 years ago
- HiCAT new project☆29Updated 6 months ago
- An accurate and widely applicable pangenome graph-based variant genotyper for diploid and polyploid genomes☆42Updated 2 months ago
- An Example of Subgenome Phasing for Complex Allopolyploidy☆13Updated last month
- use long sequenced reads to close gaps in assemblies☆39Updated 7 years ago
- BAsh-Based Automated Parallel Positive selection Analysis☆16Updated 2 months ago
- This is a method to find telomeres and centromeres in plants.☆42Updated 2 years ago
- This is a workflow that combines multiple software, mainly for whole genome annotation of eukaryotes.☆29Updated last year
- Genome haplotype assembly and assessment method☆12Updated 2 years ago
- Centromics: visualing centromeres with multiple omics data☆20Updated last year
- ☆32Updated 8 months ago
- ☆40Updated 4 months ago
- Robust identification of orthologous Synteny with the Orthology Index☆35Updated last month
- Resistify is a program which rapidly identifies and classifies plant resistance genes from protein sequences. It is designed to be lightw…☆40Updated last week
- A genome assembly assessment pipeline.☆37Updated 2 years ago
- ☆26Updated 3 years ago
- scripts☆20Updated 7 years ago
- Centromics: visualing centromeres with multiple omics data☆24Updated 9 months ago
- A rapid and accurate ensemble pipeline for graph-based variant genotyping with lower depth of short reads☆48Updated 2 months ago
- ☆45Updated 3 years ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 3 years ago
- A tool for plotting CAFE5 gene family expansion/contraction result☆33Updated 2 years ago
- Telomere compliment tools☆21Updated 3 weeks ago
- A personal pipeline to calculate Ka,Ks and Ka/Ks using PAML-yn00 with YN method☆10Updated 9 months ago
- AlleleFinder is a tool for identifying allele genes from polyploid genome.☆35Updated this week