☆24Nov 19, 2025Updated 8 months ago
Alternatives and similar repositories for TRASH_2
Users that are interested in TRASH_2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- RepeatIdentifier☆74Mar 19, 2025Updated last year
- ☆19Jul 12, 2026Updated 3 weeks ago
- PhaseGrass, a reference-based phasing workflow generating chromosome-level haplotype-resolved diploid assembly for highly heterozygous ge…☆17Jun 2, 2026Updated 2 months ago
- ☆16Apr 3, 2023Updated 3 years ago
- a gap-filling tools of genome in complex region.☆28Dec 30, 2025Updated 7 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆28May 12, 2026Updated 2 months ago
- QuickProt: A Fast and Accurate Homology-Based Protein Annotation Tool for Non-Model Organisms to Advance Comparative Genomics☆25Jul 1, 2026Updated last month
- ☆22Jul 13, 2026Updated 3 weeks ago
- Telomere compliment tools☆26Nov 17, 2025Updated 8 months ago
- A comprehensive telomere annotation tool for genome assemblies and graphs.☆18Updated this week
- Variant Calling for the HPRC2☆16May 26, 2026Updated 2 months ago
- plane sweep filtering genome alignments☆24Jul 25, 2026Updated 2 weeks ago
- Generate alternative long reads with the help of target`s assemblies, target`s PacBio HiFi reads and reference genome.☆20Mar 25, 2026Updated 4 months ago
- pangenome alignment, implicit/explicit graph, and variants for human pangenome project release 2☆23Jul 1, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- An integrative pipeline for family-level super-pangenome analysis across coding and noncoding sequences.☆21Apr 13, 2026Updated 3 months ago
- Dynamic Elongation of a Genome Assembly Path☆28Jul 27, 2026Updated 2 weeks ago
- Telomere local assembly, Improved whole genome polish, and Plastid assembly☆22Apr 25, 2025Updated last year
- source code for EVM☆126Nov 29, 2024Updated last year
- Repeat-aware polishing genomes assembled using HiFi long reads☆105Apr 7, 2026Updated 4 months ago
- RegCloser is a genome gap-closing tool based on the robust regression approach, which is conceptually applicable to de novo assembly of N…☆16Apr 22, 2024Updated 2 years ago
- A novel genome assembly pipeline based on deep learning☆71Dec 2, 2024Updated last year
- Tiberius is a deep learning gene finder.☆129Jul 27, 2026Updated 2 weeks ago
- Mabs, a genome assembly tool that optimizes parameters of Hifiasm and Flye☆37Apr 20, 2026Updated 3 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- C-Phasing/CPhasing: Phasing and scaffolding polyploid genomes based on 3C-based data (Pore-C, CiFi, Hi-C, Omni-C).☆107Jul 23, 2026Updated 2 weeks ago
- ☆156Jul 23, 2026Updated 2 weeks ago
- A complete telomere-to-telomere assembly of sheep: T2T-sheep1.0☆21Nov 2, 2024Updated last year
- ☆13Sep 11, 2025Updated 11 months ago
- ☆22Jan 13, 2026Updated 6 months ago
- Rapid alignment-free method for introgression screening and GWAS using k-mer profiles☆31Apr 22, 2026Updated 3 months ago
- tandemtwister: Tandem repeat genotyping tool☆19Feb 1, 2026Updated 6 months ago
- Extracting paths from assembly graphs☆24Jun 22, 2026Updated last month
- Construct and Analyze the North American Vitis pangenome☆29Aug 19, 2025Updated 11 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An R package to visualize chromosome scale repeat patterns and predict centromere locations.☆49May 8, 2026Updated 3 months ago
- A filter algorithm with program to filter an alignment or mapping file☆12May 15, 2025Updated last year
- ☆16Jul 25, 2021Updated 5 years ago
- ☆45Dec 11, 2025Updated 8 months ago
- A tool for performing collinearity-incorporating homology inference☆34Jul 17, 2026Updated 3 weeks ago
- Make colorful identity heatmaps of genomic sequence☆139May 24, 2024Updated 2 years ago
- Visualing species tree from ASTRAL with gene tree discordance☆34Jul 3, 2026Updated last month