☆25Sep 22, 2026Updated 2 weeks ago
Alternatives and similar repositories for TRASH_2
Users that are interested in TRASH_2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- RepeatIdentifier☆75Mar 19, 2025Updated last year
- ☆21Jul 12, 2026Updated 2 months ago
- PhaseGrass, a reference-based phasing workflow generating chromosome-level haplotype-resolved diploid assembly for highly heterozygous ge…☆17Jun 2, 2026Updated 4 months ago
- ☆16Apr 3, 2023Updated 3 years ago
- a gap-filling tools of genome in complex region.☆27Dec 30, 2025Updated 9 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆29May 12, 2026Updated 4 months ago
- QuickProt: A Fast and Accurate Homology-Based Protein Annotation Tool for Non-Model Organisms to Advance Comparative Genomics☆25Sep 25, 2026Updated 2 weeks ago
- ☆33Jul 13, 2026Updated 2 months ago
- Telomere compliment tools☆27Nov 17, 2025Updated 10 months ago
- A comprehensive C++ telomere annotation tool for genome assemblies and reads.☆18Oct 2, 2026Updated last week
- plane sweep filtering genome alignments☆24Sep 28, 2026Updated last week
- Variant Calling for the HPRC2☆19May 26, 2026Updated 4 months ago
- pangenome alignment, implicit/explicit graph, and variants for human pangenome project release 2☆24Sep 9, 2026Updated last month
- Dynamic Elongation of a Genome Assembly Path☆29Jul 27, 2026Updated 2 months ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Telomere local assembly, Improved whole genome polish, and Plastid assembly☆22Apr 25, 2025Updated last year
- source code for EVM☆129Sep 22, 2026Updated 2 weeks ago
- An integrative pipeline for family-level super-pangenome analysis across coding and noncoding sequences.☆23Apr 13, 2026Updated 5 months ago
- Repeat-aware polishing genomes assembled using HiFi long reads☆105Apr 7, 2026Updated 6 months ago
- A novel genome assembly pipeline based on deep learning☆71Dec 2, 2024Updated last year
- RegCloser is a genome gap-closing tool based on the robust regression approach, which is conceptually applicable to de novo assembly of N…☆16Apr 22, 2024Updated 2 years ago
- Tiberius is a deep learning gene finder.☆141Updated this week
- Mabs, a genome assembly tool that optimizes parameters of Hifiasm and Flye☆37Apr 20, 2026Updated 5 months ago
- C-Phasing/CPhasing: Phasing and scaffolding polyploid genomes based on 3C-based data (Pore-C, CiFi, Hi-C, Omni-C).☆113Jul 23, 2026Updated 2 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆160Aug 11, 2026Updated 2 months ago
- A complete telomere-to-telomere assembly of sheep: T2T-sheep1.0☆21Nov 2, 2024Updated last year
- ☆13Sep 11, 2025Updated last year
- ☆23Jan 13, 2026Updated 8 months ago
- Rapid alignment-free method for introgression screening and GWAS using k-mer profiles☆32Apr 22, 2026Updated 5 months ago
- tandemtwister: Tandem repeat genotyping tool☆23Feb 1, 2026Updated 8 months ago
- Extracting paths from assembly graphs☆26Jun 22, 2026Updated 3 months ago
- Construct and Analyze the North American Vitis pangenome☆29Aug 19, 2025Updated last year
- An R package to visualize chromosome scale repeat patterns and predict centromere locations.☆51May 8, 2026Updated 5 months ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A filter algorithm with program to filter an alignment or mapping file☆12May 15, 2025Updated last year
- ☆16Jul 25, 2021Updated 5 years ago
- ☆45Dec 11, 2025Updated 9 months ago
- A tool for performing collinearity-incorporating homology inference☆34Jul 17, 2026Updated 2 months ago
- Make colorful identity heatmaps of genomic sequence☆140May 24, 2024Updated 2 years ago
- Visualing species tree from ASTRAL with gene tree discordance☆35Aug 21, 2026Updated last month
- A telomere-to-telomere toolkit for gap-free genome assembly and centromeric repeat identification☆188Jun 23, 2026Updated 3 months ago