linguoliang / puzzle-hi-cLinks
☆17Updated 8 months ago
Alternatives and similar repositories for puzzle-hi-c
Users that are interested in puzzle-hi-c are comparing it to the libraries listed below
Sorting:
- ☆27Updated 5 months ago
- A Hi-C scaffolding method☆22Updated 3 years ago
- The tools are used for displaying hic signal of genome☆24Updated 4 years ago
- Genome alignment and synteny plots☆31Updated 2 years ago
- Inferring natural selection by comparative population genomic analysis across species☆25Updated last year
- Convert RepeatMasker ".out" file into a gff3 with colors!!!☆21Updated 5 years ago
- Dynamic Elongation of a Genome Assembly Path☆22Updated last year
- Domain based annotation of transposable elements☆20Updated 4 months ago
- SINE annotation tool for plant genomes☆18Updated last year
- Telomere local assembly, Improved whole genome polish, and Plastid assembly☆21Updated 4 months ago
- ☆24Updated last year
- Reconstruction of ancestral genome maps☆16Updated 7 years ago
- Toolkit for evolutionary analyses of linkage groups☆32Updated last year
- Tree House Explorer (THEx) is a novel genome browser for exploring phylogenetic and genomic data in one succinct place.☆14Updated last year
- The IntroBlocker ancestry inference algorithm☆15Updated last year
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆29Updated 3 years ago
- ☆30Updated 8 months ago
- reference-free estimation of ploidy level from whole genome sequencing data based on de Bruijn graph☆17Updated 2 years ago
- A pipeline for scaffolding a genome assembly using Hi-C☆13Updated 2 years ago
- A gap-closing software tool that uses long reads to enhance genome assembly.☆17Updated last year
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆32Updated 7 months ago
- Construct and Analyze the North American Vitis pangenome☆24Updated 3 weeks ago
- An ultra-fast and efficient tool for high frequency kmer sequencing reads extraction☆19Updated last year
- ☆28Updated 3 years ago
- Simple tools for working with Hi-C data☆18Updated 6 years ago
- Convert Tandem Repeat Finder dat file output into gff3 format☆28Updated 8 months ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- A genome assembly assessment pipeline.☆37Updated last year
- This is a method to find telomeres and centromeres in plants.☆41Updated 2 years ago
- ☆42Updated last year