BGI-Qingdao / TGS-GapCloser2Links
A gap-closing software tool that uses long reads to enhance genome assembly.
☆19Updated last year
Alternatives and similar repositories for TGS-GapCloser2
Users that are interested in TGS-GapCloser2 are comparing it to the libraries listed below
Sorting:
- ☆27Updated 6 months ago
- Python scripts to run tandem repeat finder program (Benson, 1999) and parse the results☆12Updated 6 years ago
- Centromics: visualing centromeres with multiple omics data☆24Updated 7 months ago
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆32Updated 8 months ago
- ☆30Updated 9 months ago
- Tool for globally phasing diploid assembly graphs with orthogonal data☆40Updated 10 months ago
- This is a method to find telomeres and centromeres in plants.☆42Updated 2 years ago
- A genome assembly assessment pipeline.☆37Updated last year
- ☆32Updated 6 months ago
- ☆25Updated 3 years ago
- ☆24Updated last year
- ☆21Updated last year
- HELIANO is a software for detection and classification of Helitron-like elements.☆30Updated 3 months ago
- Dynamic Elongation of a Genome Assembly Path☆22Updated last year
- A tool for quick and accurate calculation of syntenic diversity.☆42Updated 2 weeks ago
- ☆29Updated last year
- ☆17Updated 9 months ago
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆33Updated 8 months ago
- ☆28Updated 3 years ago
- The tools are used for displaying hic signal of genome☆24Updated 4 years ago
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 2 years ago
- Create a pseudohaploid assembly from a partially resolved diploid assembly☆32Updated 5 years ago
- Toolkit for evolutionary analyses of linkage groups☆32Updated last year
- Draw a dot plot from a paf alignment☆34Updated 2 weeks ago
- ☆40Updated 2 years ago
- Reconstruction of ancestral genome maps☆16Updated 7 years ago
- Inferring natural selection by comparative population genomic analysis across species☆25Updated last year
- An ultra-fast and efficient tool for high frequency kmer sequencing reads extraction☆19Updated last year
- ☆41Updated 4 months ago
- use long sequenced reads to close gaps in assemblies☆39Updated 7 years ago