BGI-Qingdao / TGS-GapCloser2Links
A gap-closing software tool that uses long reads to enhance genome assembly.
☆22Updated last year
Alternatives and similar repositories for TGS-GapCloser2
Users that are interested in TGS-GapCloser2 are comparing it to the libraries listed below
Sorting:
- ☆31Updated 9 months ago
- ☆32Updated last year
- Python scripts to run tandem repeat finder program (Benson, 1999) and parse the results☆13Updated 6 years ago
- Centromics: visualing centromeres with multiple omics data☆25Updated 10 months ago
- ☆24Updated 2 months ago
- Tool for globally phasing diploid assembly graphs with orthogonal data☆42Updated last year
- Dynamic Elongation of a Genome Assembly Path☆25Updated last month
- A genome assembly assessment pipeline.☆38Updated 2 years ago
- HELIANO is a software for detection and classification of Helitron-like elements.☆32Updated 7 months ago
- This repository contains relevant code and explanation for ”Leveraging a phased pangenome to design ideal haplotypes for hybrid potato br…☆34Updated 2 months ago
- ☆21Updated last year
- ☆33Updated 10 months ago
- A tool for quick and accurate calculation of syntenic diversity.☆42Updated 3 months ago
- ☆29Updated 3 weeks ago
- Reconstruction of ancestral genome maps☆16Updated 7 years ago
- ☆29Updated 3 years ago
- ☆21Updated last year
- SyntenyFinder contains a collection of scripts for performing and visualizing macrosynteny analyses. It supports annotated chromosome-lev…☆33Updated last year
- Draw a dot plot from a paf alignment☆37Updated 4 months ago
- Toolkit for evolutionary analyses of linkage groups☆33Updated last year
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆31Updated 4 years ago
- ☆41Updated 8 months ago
- Automated pipeline for running CoalHMM☆13Updated last week
- ☆16Updated last year
- Genome alignment and synteny plots☆33Updated 2 years ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆38Updated 2 years ago
- Detecting transposable element invasions without repeat library. Detects also horizontal transfer events and endogenized viruses. All you…☆17Updated last year
- ☆17Updated last month
- A quick user guide for de novo transposable element (TE) library generation and TE screening. Utilising; the Extensive de novo TE Annotat…☆27Updated 3 years ago
- ☆28Updated 3 years ago