ArcInstitute / bqtoolsLinks
A command line utilty for working with BINSEQ files
☆35Updated last week
Alternatives and similar repositories for bqtools
Users that are interested in bqtools are comparing it to the libraries listed below
Sorting:
- A minimal copy fastq and fasta reader built for parallel support and paired end processing☆42Updated last month
- A high efficiency binary format for sequencing data☆95Updated 2 weeks ago
- Hierarchical binned indexed data store for on-disk genomic data.☆13Updated last year
- A minimap2 implementation with binseq inputs☆17Updated 2 months ago
- bedtools-like functionality for interval sets in rust☆55Updated 6 months ago
- convert reads from repeated measures of same piece of DNA into spaced matricies for deep learners.☆14Updated 2 years ago
- A Rust library for storing generic genomic data by sorted chromosome name☆17Updated last year
- a minimal, scriptable genome browser for python☆53Updated last year
- A Rust library and command line tool for working with genomic ranges and their data.☆101Updated last year
- A lightweight platform-accelerated library for biological motif scanning using position weight matrices.☆61Updated 2 months ago
- Fast interval intersection library☆44Updated 5 months ago
- gia: Genomic Interval Arithmetic☆66Updated last year
- overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites☆34Updated 8 months ago
- HyGen: Compact and Efficient Genome Sketching using Hyperdimensional Vectors☆30Updated last year
- Fast FASTQ sample demultiplexing in Rust.☆66Updated last week
- ☆14Updated 6 months ago
- Fast sequencing data quality metrics☆31Updated 5 months ago
- sfasta☆35Updated 9 months ago
- Wrapper over rust-htslib for building collections of BAM records for testing.☆10Updated 2 months ago
- expressions on VCFs☆91Updated 9 months ago
- Cookiecutter profile for making a NextFlow-based bioinformatics tool☆17Updated last year
- Singular Genomics Demultiplexing Tool