aseyboldt / fastq-rsLinks
☆51Updated 2 years ago
Alternatives and similar repositories for fastq-rs
Users that are interested in fastq-rs are comparing it to the libraries listed below
Sorting:
- FASTA and FASTQ parsing in Rust☆79Updated 4 months ago
- Alignment-based gene expression quantification☆29Updated 4 months ago
- Rust bindings to minimap2 library☆101Updated 3 weeks ago
- A high-performance BigWig and BigBed library in Rust☆100Updated 2 months ago
- The D4 Quantitative Data Format☆166Updated 3 months ago
- A bit-packed k-mer representation (and relevant utilities) for rust☆48Updated last year
- Fasten toolkit, for streaming operations on fastq files☆79Updated 3 months ago
- bioinformatics toolkit in rust☆90Updated 2 months ago
- Single-Cell RNA-seq pseudo-aligner☆51Updated last year
- Bam Error Stats Tool (best): analysis of error types in aligned reads.☆134Updated 5 months ago
- gia: Genomic Interval Arithmetic☆65Updated 11 months ago
- ☆58Updated 2 years ago
- Flexible, uncertainty-aware variant calling with parameter free filtration via FDR control.☆128Updated last week
- an API for intersections of genomic data☆75Updated this week
- Fast FASTX parsing and k-mer methods in Rust☆195Updated 2 weeks ago
- Low level bindings and wrapper for slow5lib, an alternative for ONT Nanopore sequencing FAST5 output☆10Updated 9 months ago
- Command line utility for working with next-generation sequencing files.☆35Updated last month
- expressions on VCFs☆85Updated 3 months ago
- De Bruijn graphs in Rust☆71Updated last year
- Command line utility for manipulating Illumina-generated FASTQ files.☆87Updated 5 months ago
- A Rust library and command line tool for working with genomic ranges and their data.☆101Updated last year
- A high efficiency binary format for sequencing data☆68Updated last month
- ntHash implementation in Rust☆36Updated last year
- bedtools-like functionality for interval sets in rust☆52Updated 11 months ago
- Efficient querying of biological databases☆40Updated this week
- ☆11Updated 3 years ago
- A genomic minhashing implementation in Rust☆99Updated last month
- Rust implmentation of VCF parser☆24Updated 2 years ago
- Per-base per-nucleotide depth analysis☆137Updated last week
- Tools for working FASTQ files from sequencers (R1/R2/I1/I2)☆13Updated 8 months ago