Mumemto: multi-MUM and MEM finding across pangenomes
☆134Jul 29, 2026Updated 2 weeks ago
Alternatives and similar repositories for mumemto
Users that are interested in mumemto are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Panacus is a tool for computing statistics for GFA-formatted pangenome graphs☆138Updated this week
- Fast, Cache-Efficient, and Scalable Queries on Pangenomes☆45Mar 9, 2026Updated 5 months ago
- A small, auxiliary index to massively improve parallel fastq parsing☆32Mar 6, 2026Updated 5 months ago
- implicit pangenome graph☆110Aug 8, 2026Updated last week
- Constructing a pangenome gene graph☆212Aug 11, 2025Updated last year
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Multiple sequence alignment of long tandem repeats☆31Jun 23, 2026Updated last month
- Pairwise whole genome aligner☆243Jul 29, 2026Updated 2 weeks ago
- Genotyping of copy number sensitive allele-specific haplotypes☆29Jun 18, 2026Updated 2 months ago
- ☆198Feb 10, 2026Updated 6 months ago
- Detecting multi-genome synteny using minimizer graph mapping☆115Jun 12, 2026Updated 2 months ago
- MEMO: MEM-based pangenome indexing for k-mer queries☆20Jun 11, 2024Updated 2 years ago
- PG-SCUnK mesure quality of Pan-Genome Graphs using Single Copy and Universal k-mers☆25Feb 16, 2026Updated 6 months ago
- A multiscale pangenome browser☆30Jul 18, 2026Updated last month
- Pangenome graphs visualisation, distance computing, reconstruction of sequences and other utility functions☆38Apr 28, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- base-accurate DNA sequence alignments using WFA and mashmap3☆222Aug 9, 2026Updated last week
- Whole Genome Alignment Tools☆225Nov 6, 2025Updated 9 months ago
- an interactive visualization and interpretation framework of reference-projected pangenome graphs