overlapping bases in read-pairs from a fragment indicate accuracy and reveal error-prone sites
☆34Jun 6, 2025Updated last year
Alternatives and similar repositories for fraguracy
Users that are interested in fraguracy are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Tools to gather evidence for structural variation via breakpoint detection.☆20Mar 27, 2026Updated 7 months ago
- How many distinct k-mers are there in a sequence?☆11Oct 26, 2026Updated last week
- seqcover allows users to view coverage for hundreds of genes and dozens of samples☆51Apr 9, 2021Updated 5 years ago
- expressions on VCFs☆95Sep 25, 2026Updated last month
- Structural variant VCF annotation, filtering, duplicate removal and comparison☆38Sep 3, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Hidden Markov Model based Copy number caller☆20Jul 18, 2026Updated 3 months ago
- ☆21Dec 26, 2025Updated 10 months ago
- Per-base per-nucleotide depth analysis☆153Updated this week
- Taxonomy classification of viral sequences / contigs☆13Jul 15, 2025Updated last year
- Non-parametric structural variant genotyper☆15Nov 18, 2021Updated 4 years ago
- add true-negative SVs from a population callset to a truth-set.☆14Jun 17, 2022Updated 4 years ago
- Bam Error Stats Tool (best): analysis of error types in aligned reads.☆142Feb 14, 2025Updated last year
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆59Feb 17, 2022Updated 4 years ago
- VariantStore: A Large-Scale Genomic Variant Search Index☆40Jul 9, 2021Updated 5 years ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Deep learning-based structural variant filtering method☆40Nov 19, 2023Updated 2 years ago
- ☆11Apr 25, 2024Updated 2 years ago
- sort genomic data☆36Oct 21, 2026Updated last week
- vcfdist: Accurately benchmarking phased variant calls☆90Aug 28, 2026Updated 2 months ago
- IndexTools is a toolkit for extremely fast NGS analysis based on index files.☆17Aug 19, 2022Updated 4 years ago
- Benchmark structural variant calls against a reference set☆18Jan 26, 2026Updated 9 months ago
- Viral genome coverage evaluation for metagenomic diagnostics☆27Jul 9, 2026Updated 3 months ago
- Structural variant pipeline☆18Jun 25, 2020Updated 6 years ago
- Exact, SIMD-accelerated sequence alignment (Smith-Waterman, Needleman-Wunsch, semi-global, overlap)☆12Aug 10, 2026Updated 2 months ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Targeted and non-targeted anticancer drugs and drug regimens☆31Oct 22, 2026Updated last week
- seqfu - Sequece Fastx Utilities☆133Oct 13, 2026Updated 2 weeks ago
- igv.js standalone page generator and automatic configuration to view bam/cram/vcf/bed. "working in under 1 minute"☆132Oct 14, 2025Updated last year
- Guess till correct: Gungnir codec enabling high error-tolerance and low-redundancy DNA storage through substantial computing power☆13Mar 2, 2026Updated 8 months ago
- ☆24Feb 22, 2023Updated 3 years ago
- using all the bits for echt rapid variant annotation and filtering☆166Jul 22, 2026Updated 3 months ago
- A Rust library providing fully dynamic sets of k-mers with high locality☆47May 13, 2026Updated 5 months ago
- Hierarchical binned indexed data store for on-disk genomic data.☆13Jan 18, 2025Updated last year
- Optimal distance lower bound k-mer sampling.☆12Jun 19, 2024Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Callable Cancer Loci - assessment of sequencing coverage for actionable and pathogenic loci in cancer☆20Dec 8, 2020Updated 5 years ago
- Skiver: Reference-free quality control of (meta)genomic sequencing datasets using (k, v)-mer sketches☆13Aug 19, 2026Updated 2 months ago
- Analytics toolkit for Illumina sequencer metrics.☆12Aug 16, 2024Updated 2 years ago
- A Rust library for storing generic genomic data by sorted chromosome name☆18Sep 26, 2024Updated 2 years ago
- Experiments with using BIGSI data structure for metagenomic and QC applications☆19Aug 12, 2024Updated 2 years ago
- Pipeline for generating RNAseq-based cancer patient reports☆15Aug 24, 2026Updated 2 months ago
- bedpull - Pull the query sequence from bam or fasta references using a bed file☆16Sep 24, 2026Updated last month