A mapper for 10x-flex single cell sequencing reads with fixed abstract geometries
☆41Mar 3, 2026Updated 2 weeks ago
Alternatives and similar repositories for cyto
Users that are interested in cyto are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A command line utilty for working with BINSEQ files☆36Feb 28, 2026Updated 3 weeks ago
- A simple, intuitive and Efficient single cell binary Data Storage format☆15Oct 10, 2019Updated 6 years ago
- ☆16Jan 6, 2025Updated last year
- Sparse Lazy Array Format (SLAF) for Single-Cell Genomics☆56Mar 14, 2026Updated last week
- White/Pink noise generator. Based on 'Noisy.app', which was based on 'Noise'.☆13Oct 29, 2009Updated 16 years ago
- Skip the peaks and expose RNA-binding in CLIP data☆10Mar 12, 2026Updated last week
- Hera-T, a fast and accurate tool for estimating gene abundances in single cell data generated by the 10X-Chromium protocol☆18Nov 9, 2021Updated 4 years ago
- scRNA-seq analysis beyond gene annotations using transcriptionally active regions (TARs) generated from sequence alignment data☆10Jul 25, 2022Updated 3 years ago
- Single-Cell RNA-seq pseudo-aligner☆52May 6, 2024Updated last year
- Github Repository for multiOmics Integration project involving genomics, epigenomics and transcriptomics☆13Aug 7, 2020Updated 5 years ago
- This is the repo for CROssBARv2 Knowledge Graph data. CROssBARv2 is a heterogeneous general-purpose biomedical KG-based system.☆11Feb 4, 2026Updated last month
- Highly informative TCR representation model☆15Nov 26, 2025Updated 3 months ago
- [CRAN-Submission-Ready] All your shinylive apps are belong to us☆14Aug 18, 2025Updated 7 months ago
- A simple Python class for parsing useful visitor and referral data from a Google Analytics cookie.☆29Nov 13, 2013Updated 12 years ago
- RNASeq-Pipeline for Quantification and Enrichment Analysis☆12May 30, 2024Updated last year
- Single Rust: Pioneering single-cell analysis with Rust's concurrency for scalable, high-throughput pipelines. 🧬🚀☆95Nov 24, 2025Updated 3 months ago
- Cross-attention-based cell-cell interaction inference from ST data.☆18Mar 11, 2026Updated last week
- A GatingML Interface for Cross Platform Cytometry Data Sharing☆33Feb 10, 2026Updated last month
- A single-cell RNA-seq data generative model☆18Jan 11, 2025Updated last year
- Demo repository for creating a Quarto workflow with {quarto-webr} and {quarto-pyodide}☆18Jun 27, 2024Updated last year
- Large language model Mistral for DNA☆21Sep 12, 2025Updated 6 months ago
- The BioJS MSA viewer wrapped into an R package☆12Sep 27, 2016Updated 9 years ago
- Public repo for rbio, a biologically-informed reasoning model trained on virtual cell models as verifiers☆135Nov 24, 2025Updated 3 months ago
- Template for creating a BioCypher-driven knowledge graph☆13Jan 15, 2026Updated 2 months ago
- Automatically use the latest “vX.X.X” tag as version in your Python package☆13Mar 16, 2026Updated last week
- Prioritizing Cancer Driver Genes Using Genomics Data☆17Dec 22, 2025Updated 3 months ago
- ALP floating point compression in Rust☆50Mar 16, 2026Updated last week
- Quarto revealjs slides to teach introductory statistics concepts using webR.☆25Jul 2, 2024Updated last year
- ScaleBio Single-cell RNA Nextflow Workflow☆40Jul 2, 2025Updated 8 months ago
- Rust utility code☆32Feb 9, 2024Updated 2 years ago
- Lab notebook for people who like the command line.☆11Mar 6, 2026Updated 2 weeks ago
- Solutions to Rosalind Bioinformatics Problems☆11Nov 9, 2014Updated 11 years ago
- A Transcriptomics-Proteomics Integration Pipeline☆18Apr 11, 2024Updated last year
- Simple and transparent support for compressed files.☆81Feb 27, 2026Updated 3 weeks ago
- The nhite engine for Terraform☆11Sep 26, 2017Updated 8 years ago
- Alignment-based gene expression quantification☆36Feb 8, 2026Updated last month
- Sysbox-fs repository☆17Updated this week
- Tissue reassembly with generative AI☆26May 22, 2025Updated 10 months ago
- A fast, simple, multi-threaded string interning library.☆18Jul 11, 2025Updated 8 months ago