Rust coder/decoder for Nucleotide Archival Format (NAF) files.
☆10Jan 31, 2025Updated last year
Alternatives and similar repositories for nafcodec
Users that are interested in nafcodec are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- toolkit for file system virtualisation of random access compressed FASTA, FAI, DICT & TWOBIT files☆22Updated this week
- Just another minhash implementation.☆12May 28, 2026Updated last month
- A taxonomic classifier for shotgun metagenomics reads☆11Apr 4, 2025Updated last year
- A lightweight platform-accelerated library for biological motif scanning using position weight matrices.☆64Mar 25, 2026Updated 3 months ago
- DFAST Quality Control: Taxonomy and completeness check☆18Jun 17, 2026Updated last month
- End-to-end encrypted email - Proton Mail • AdSpecial offer: 40% Off Yearly / 80% Off First Month. All Proton services are open source and independently audited for security.
- Bioinformatics 101 tool for counting unique k-length substrings in DNA☆33Feb 17, 2026Updated 5 months ago
- Rust library for processing sequencing reads.☆25Sep 2, 2024Updated last year
- your friendly pangenome graph genotyper☆10Feb 6, 2023Updated 3 years ago
- Toolkit for manipulating FASTA and SAM files☆23Mar 14, 2024Updated 2 years ago
- k-mers and the like☆23Updated this week
- RAxML Next Generation: faster, easier-to-use and more flexible☆10Mar 26, 2026Updated 3 months ago
- Fasten toolkit, for streaming operations on fastq files☆82Oct 24, 2025Updated 8 months ago
- Viral genome coverage evaluation for metagenomic diagnostics☆27Jul 9, 2026Updated 2 weeks ago
- BAM/SAM/CRAM/FASTA reader, pileup engine, BCF/BAM writing☆27Jun 25, 2026Updated 3 weeks ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A rust wrapper for the spoa C++ partial order alignment library☆10Jun 11, 2025Updated last year
- A minimal copy fastq and fasta reader built for parallel support and paired end processing☆45Jul 16, 2026Updated last week
- A flexible and fast sgRNA counter from FASTQ Files☆11Jun 17, 2026Updated last month
- kmer based feature extraction tool for bioinformatics, metagenomics, AI/ML and more☆47Jul 12, 2026Updated last week
- parallel c prinseq☆21Aug 10, 2022Updated 3 years ago
- CLI tool to verify workflow reproducibility☆17Jan 29, 2024Updated 2 years ago
- ☆17Nov 19, 2025Updated 8 months ago
- PyO3 bindings and Python interface to skani, a method for fast genomic identity calculation using sparse chaining.☆29Aug 20, 2025Updated 11 months ago
- Python implementation of barrnap (Bacterial ribosomal RNA predictor)☆28Jun 14, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Read contamination removal☆25Jan 24, 2024Updated 2 years ago
- Convert vcf in parquet☆32Jan 23, 2025Updated last year
- SWORD - a highly efficient protein database search☆26Jan 15, 2024Updated 2 years ago
- ClaMSA (Classify Multiple Sequence Alignments).☆13Nov 21, 2024Updated last year
- ☆32Mar 3, 2026Updated 4 months ago
- Obsidian plugin enabling the use of icons in Mermaid diagrams.☆17Jun 1, 2026Updated last month
- ☆18Nov 21, 2024Updated last year
- gia: Genomic Interval Arithmetic☆67Aug 21, 2024Updated last year
- ☆13Dec 26, 2025Updated 6 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- A Rust library for parsing, writing and manipulating Genbank sequence files☆24Apr 20, 2025Updated last year
- GLASS consortium☆14May 31, 2022Updated 4 years ago
- Shared k-mer content between two genomes☆18Jun 21, 2023Updated 3 years ago
- Search for a set of compatible indexes for your sequencing experiment☆11Sep 6, 2019Updated 6 years ago
- Host depletion optimised for clinical metagenomic sequencing applications☆19Jul 9, 2026Updated 2 weeks ago
- A plant organellar Graphical Fragment Assembly toolkit☆16Sep 10, 2025Updated 10 months ago
- Nucleotide Archival Format - Compressed file format for DNA/RNA/protein sequences☆64Aug 1, 2025Updated 11 months ago