zstephens / telogatorLinks
A method for measuring chromosome-specific telomere length from long reads
☆22Updated last year
Alternatives and similar repositories for telogator
Users that are interested in telogator are comparing it to the libraries listed below
Sorting:
- A module for improving the insertion sequences of structural variant calls☆31Updated 4 years ago
- ☆18Updated last year
- Tandem Repeats Finder: a program to analyze DNA sequences☆16Updated last month
- Invertory of TE-gene isoforms☆13Updated 2 years ago
- A tool for motif annotation and visualization in tandem repeats.☆11Updated 3 months ago
- Genotyping of segregating mobile elements insertions☆19Updated 4 years ago
- SV calling for diploid assemblies☆28Updated last year
- A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly☆11Updated 8 years ago
- Phasing reads with secondary alignments☆20Updated 9 months ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- ☆15Updated 4 years ago
- Scripts to reproduce TrioBinning manuscript☆17Updated 5 years ago
- Very simple and configurable all-in-one dotplot program☆14Updated 2 years ago
- Combine structural variation outputs from long sequencing reads into a superior call set☆18Updated last month
- Method to optimally select samples for validation and resequencing☆28Updated 4 years ago
- Phase reads, assemble haplotypes and detect SVs☆19Updated 4 years ago
- ☆31Updated 5 years ago
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Updated last year
- Consensus genome annotation using OMA☆26Updated 2 months ago
- Gene copy number prediction from k-mer frequencies☆13Updated last year
- R package and wrapper functions for identifying serial structural variations from genome assemblies☆27Updated 11 months ago
- Tool for decomposition centromeric assemblies and long reads into monomers☆35Updated 3 years ago
- Convert RepeatMasker ".out" file into a gff3 with colors!!!☆21Updated 5 years ago
- ☆21Updated 6 months ago
- ☆16Updated 2 years ago
- TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain☆21Updated last year
- Distribution of TEs and their relationship to genes in host genome☆23Updated 2 years ago
- Human pan-genome analysis pipeline☆30Updated 5 years ago
- Identification of conserved non-coding sequences in plants☆22Updated last week
- Tools for merging Tandem Repeat VCF files☆33Updated 4 months ago