A method for measuring chromosome-specific telomere length from long reads
☆22May 20, 2024Updated 2 years ago
Alternatives and similar repositories for telogator
Users that are interested in telogator are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A framework for extracting telomeric reads from single-molecule sequencing experiments, describing their sequence variation and motifs, a…☆16Jan 25, 2024Updated 2 years ago
- A method for measuring allele-specific telomere length and characterizing telomere variant repeat sequences from long reads.☆37Updated this week
- parallelLastz: Running Lastz in parallel☆18Sep 13, 2026Updated 3 weeks ago
- A tool for recovering synteny blocks from multiple alignment☆34Oct 18, 2021Updated 4 years ago
- ☆15Aug 22, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Reduction of Althaps and Duplicate Contigs for Improved Downstream Analysis☆21Oct 2, 2026Updated last week
- A software for calculating telomere length☆78Oct 24, 2018Updated 7 years ago
- A personal pipeline to calculate Ka,Ks and Ka/Ks using PAML-yn00 with YN method☆10Feb 26, 2025Updated last year
- A plant organellar Graphical Fragment Assembly toolkit☆17Sep 24, 2026Updated 2 weeks ago
- ☆24Jul 30, 2025Updated last year
- ☆13Nov 15, 2017Updated 8 years ago
- Close assembly gaps using long-reads at high accuracy.☆52Feb 20, 2024Updated 2 years ago
- Improved Phased Assembler☆29Mar 11, 2022Updated 4 years ago
- Pipeline for genome scaffolding by modelling distributions of HiC pairs☆12Dec 7, 2022Updated 3 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- ☆17Mar 2, 2024Updated 2 years ago
- base-accurate DNA sequence alignments using edlib and mashmap2☆32Feb 15, 2021Updated 5 years ago
- Structural Variants Assessment Based on Haplotype-resolved Assemblies☆22Apr 28, 2023Updated 3 years ago
- Identifying large scale inversions between two genomes by mapping genome 1's unique kmers onto genome 2.☆10Jun 6, 2025Updated last year
- A comparative genome scaffolding tool☆16Oct 6, 2018Updated 8 years ago
- Unzip assembly graphs with Hi-C data and/or long reads.☆29May 7, 2026Updated 5 months ago
- Compute mean telomere length from Whole Genome Sequencing data.☆15Feb 15, 2024Updated 2 years ago
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆49Feb 23, 2021Updated 5 years ago
- Toolkit for VNTR genotyping and repeat-pan genome graph construction☆36Aug 18, 2025Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- de Bruijn graph cOrrectiOn from graph aLignment☆11Jul 20, 2020Updated 6 years ago
- Code for phasing SVs with SNPs☆54Mar 27, 2020Updated 6 years ago
- a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees☆32Jul 13, 2026Updated 2 months ago
- CHM13 human reference genome issue tracking☆20Jan 18, 2024Updated 2 years ago
- Reducing reference bias using multiple population reference genomes☆34May 27, 2024Updated 2 years ago
- ☆10Jun 9, 2020Updated 6 years ago
- Haplotype-aware genome assembly toolkit☆30Jan 8, 2020Updated 6 years ago
- PECAT, a phased error correct and assembly tool☆68Dec 8, 2025Updated 10 months ago
- Heuristic, parsimony-based ancestral recombination graph inference☆17Aug 25, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Identify and find telomeres, or telomeric repeats in a genome.☆177Updated this week
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆31Mar 5, 2018Updated 8 years ago
- ☆78Jun 12, 2020Updated 6 years ago
- RegCloser is a genome gap-closing tool based on the robust regression approach, which is conceptually applicable to de novo assembly of N…☆16Apr 22, 2024Updated 2 years ago
- ☆12Feb 16, 2025Updated last year
- recompute GFA link overlaps☆26Sep 14, 2022Updated 4 years ago
- assembly evaluation tool☆36May 11, 2022Updated 4 years ago