ktan8 / nanopore_telomere_basecallLinks
☆14Updated 2 years ago
Alternatives and similar repositories for nanopore_telomere_basecall
Users that are interested in nanopore_telomere_basecall are comparing it to the libraries listed below
Sorting:
- HAT is a set of tools for calling de novo variants from whole-genome sequencing data.☆24Updated last year
- ☆10Updated 5 years ago
- ☆13Updated 4 months ago
- Gene copy number prediction from k-mer frequencies☆13Updated last year
- Population-scale detection of non-reference sequence variants using colored de Bruijn Graphs☆26Updated last year
- Phase reads, assemble haplotypes and detect SVs☆19Updated 4 years ago
- ☆16Updated 3 years ago
- MEMO: MEM-based pangenome indexing for k-mer queries☆18Updated last year
- A program to generate a graph which presents a simplified representation of several full length genomes☆13Updated 7 years ago
- Consensus genome annotation using OMA☆27Updated 3 months ago
- ClaMSA (Classify Multiple Sequence Alignments).☆13Updated 10 months ago
- ☆10Updated 5 years ago
- A method for measuring chromosome-specific telomere length from long reads☆22Updated last year
- ☆16Updated 4 years ago
- JTK -- a regional diploid genome assembler☆25Updated 11 months ago
- ☆12Updated last year
- A framework for extracting telomeric reads from single-molecule sequencing experiments, describing their sequence variation and motifs, a…☆16Updated last year
- interactive Multi Objective K-mer Analysis☆23Updated 2 years ago
- PAF (pairwise alignment format) validator based on extended CIGAR strings☆15Updated 2 months ago
- Convert HAL to VG☆22Updated last year
- ☆12Updated 7 years ago
- A nextflow pipeline for polishing CLR assemblies☆17Updated 2 years ago
- Efficient indexing and querying of annotations in a pangenome graph☆10Updated 4 months ago
- Phasing reads with secondary alignments☆20Updated 10 months ago
- Tools for haplotype-wise reconstruction of pseudomolecules☆22Updated last month
- Code repository for the T2T-Y paper☆24Updated 2 years ago
- ☆12Updated 4 years ago
- Simultaneous multi-sample transcript assembler for RNA-seq data☆17Updated 10 months ago
- Prefix-renaming FASTA records really fast.☆16Updated last year
- Long read aligner for cyclic and acyclic pangenome graphs☆39Updated last year