CHM13 human reference genome issue tracking
☆20Jan 18, 2024Updated 2 years ago
Alternatives and similar repositories for CHM13-issues
Users that are interested in CHM13-issues are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- A mass non-curated database of potential telomeric repeat sequences across the eukaryotic tree of life.☆13Oct 10, 2026Updated 3 weeks ago
- ultrafast structural variation detection from circular consensus sequencing reads☆13Mar 8, 2022Updated 4 years ago
- Reduction of Althaps and Duplicate Contigs for Improved Downstream Analysis☆21Oct 2, 2026Updated 3 weeks ago
- The complete sequence of a Chinese individual☆14Oct 8, 2024Updated 2 years ago
- Evaluation and polishing workflows for T2T genome assemblies☆175Sep 15, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- RegCloser is a genome gap-closing tool based on the robust regression approach, which is conceptually applicable to de novo assembly of N…☆16Apr 22, 2024Updated 2 years ago
- Set of script for the paper on the cattle graph genome☆14Jan 10, 2023Updated 3 years ago
- Reference-agnostic Representation and Visualization of Pan-genomes☆19Sep 16, 2021Updated 5 years ago
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆49Feb 23, 2021Updated 5 years ago
- ☆16Apr 9, 2021Updated 5 years ago
- Improvement of Long Read Assemblies (ILRA) is a pipeline to help in the post assembly process (finishing) by cleaning and merging contigs…☆13Aug 24, 2026Updated 2 months ago
- BlockPolish: accurate polishing of long-read assembly via block divide-and-conquer☆17Jun 15, 2023Updated 3 years ago
- ☆63Sep 15, 2025Updated last year
- JTK -- a regional diploid genome assembler☆27Apr 22, 2026Updated 6 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Differential k-mer analysis☆42Jan 29, 2024Updated 2 years ago
- ☆15Aug 22, 2023Updated 3 years ago
- A module for improving the insertion sequences of structural variant calls☆33Jul 14, 2021Updated 5 years ago
- A nextflow pipeline for polishing CLR assemblies☆18Feb 3, 2023Updated 3 years ago
- Minimizer-based assembly scaffolding and mapping using long reads☆56Apr 1, 2026Updated 6 months ago
- Close assembly gaps using long-reads at high accuracy.☆52Feb 20, 2024Updated 2 years ago
- Scotch pipeline for indel calling.☆10Nov 25, 2019Updated 6 years ago
- Experimental String Graph construction and processing☆25Aug 14, 2023Updated 3 years ago
- Code for assembly approach presented in "Haplotype-resolved assembly of a tetraploid potato genome using long reads and low-depth offspri…☆15Nov 20, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Improved Phased Assembler☆29Mar 11, 2022Updated 4 years ago
- MUM&Co uses Whole Genome Alignment information provided by MUMmer (only v4) to detect Structural Variation☆76Jan 12, 2026Updated 9 months ago
- HiC-Hiker: A probabilistic model to determine contig orientation in chromosome-length scaffolds with Hi-C☆26Jan 14, 2021Updated 5 years ago
- A method for measuring chromosome-specific telomere length from long reads☆22May 20, 2024Updated 2 years ago
- ☆11Mar 4, 2025Updated last year
- A software for discovery, genotyping and characterization of structural variants☆22Sep 11, 2024Updated 2 years ago
- ☆43Oct 6, 2025Updated last year
- MultiBreak-SV identifies structural variants from next-generation paired end data, third-generation long read data, or data from a combin…☆12Jul 19, 2016Updated 10 years ago
- Toolkit for VNTR genotyping and repeat-pan genome graph construction☆37Aug 18, 2025Updated last year
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- ☆14Sep 21, 2026Updated last month
- ☆124Sep 29, 2026Updated last month
- ☆78Jun 12, 2020Updated 6 years ago
- Yet another k-mer analyzer☆178Dec 30, 2025Updated 10 months ago
- ☆11Apr 3, 2023Updated 3 years ago
- Evaluate variant calls and its combination with k-mer multiplicity☆73Dec 2, 2022Updated 3 years ago
- ☆10Oct 21, 2019Updated 7 years ago