GillesFischerSorbonne / telofinderLinks
☆16Updated last year
Alternatives and similar repositories for telofinder
Users that are interested in telofinder are comparing it to the libraries listed below
Sorting:
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- Consensus genome annotation using OMA☆31Updated last week
- Simple tools for working with Hi-C data☆18Updated 7 years ago
- Generate pan-gene sets, given a collection of genome assemblies and corresponding gene models.☆20Updated 3 weeks ago
- Reduction of Althaps and Duplicate Contigs for Improved Hi-C Scaffolding☆20Updated 10 months ago
- The MafFilter genome alignment processor☆19Updated 3 weeks ago
- A module for improving the insertion sequences of structural variant calls☆33Updated 4 years ago
- A Hi-C scaffolding method☆22Updated 4 years ago
- TD2☆31Updated last week
- Scripts to do haplotype analysis on pan genomes.☆20Updated 5 years ago
- use variant nesting information to flter overlapping sites from vg deconstruct output☆31Updated 7 months ago
- ☆29Updated 2 years ago
- TEFLoN uses paired-end illumina sequence data to discover and genotype transposable elements present in your samples.☆13Updated 4 years ago
- Very simple and configurable all-in-one dotplot program☆14Updated 2 years ago
- SV calling for diploid assemblies☆30Updated last year
- Phasing reads with secondary alignments☆21Updated last year
- ☆27Updated 4 months ago
- ☆31Updated 6 years ago
- A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly☆11Updated 8 years ago
- Scripts used to perform analyses in Rice et al. (2023)☆16Updated 2 years ago
- A tool for recovering synteny blocks from multiple alignment☆32Updated 4 years ago
- Yet another Hi-C scaffolding tool☆22Updated last year
- Tools for haplotype-wise reconstruction of pseudomolecules☆22Updated 4 months ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 5 years ago
- Improved Phased Assembler☆28Updated 3 years ago
- This is used to achieve haplotype-resolved assembly of tetraploid genomes using gamete sequencings☆12Updated 4 years ago
- Detect and phase minor SNVs from long-read sequencing data☆14Updated 4 years ago
- A method for measuring chromosome-specific telomere length from long reads☆22Updated last year
- Centromere mapping and annotation pipeline☆18Updated 2 weeks ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆31Updated 4 years ago