GillesFischerSorbonne / telofinder
☆12Updated 10 months ago
Alternatives and similar repositories for telofinder:
Users that are interested in telofinder are comparing it to the libraries listed below
- The MafFilter genome alignment processor☆17Updated 4 months ago
- Reduction of Althaps and Duplicate Contigs for Improved Hi-C Scaffolding☆19Updated 5 months ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 4 years ago
- A Hi-C scaffolding method☆22Updated 3 years ago
- Yet another Hi-C scaffolding tool☆18Updated 2 months ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 6 years ago
- Genome assembly scaffolding using information from paired-end/mate-pair libraries, long reads, and synteny to closely related species.☆24Updated 6 years ago
- Very simple and configurable all-in-one dotplot program☆12Updated last year
- ☆24Updated last year
- ☆12Updated 4 years ago
- A nextflow pipeline for polishing CLR assemblies☆16Updated last year
- Scripts to do haplotype analysis on pan genomes.☆21Updated 4 years ago
- ☆21Updated 4 months ago
- A derivative of GenomeScope2.0 modified to work with FastK☆9Updated last year
- A tool for recovering synteny blocks from multiple alignment☆29Updated 3 years ago
- Genome assembly soft-masking using Red (REpeat Detector)☆12Updated 6 years ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆25Updated 3 years ago
- Visualising discordant reads☆15Updated 9 years ago
- Hapo-G is a tool that aims to improve the quality of genome assemblies by polishing the consensus with accurate reads.☆25Updated 9 months ago
- R package and wrapper functions for identifying serial structural variations from genome assemblies☆26Updated 3 months ago
- This is the official site for JASPER (Jellyfish based Assembly Sequence Polisher for Error Reduction)☆12Updated 6 months ago
- Simple tools for working with Hi-C data☆16Updated 6 years ago
- Programs implementing the trio-binning genome assembly method☆19Updated last year
- Improved Phased Assembler☆27Updated 2 years ago
- TransposonPSI involves a PSI-blast search of a protein or nucleotide sequence against a set of profiles of proteins corresponding to majo…☆13Updated 4 years ago
- FastK based version of Merqury☆22Updated last month
- Simultaneous multi-sample transcript assembler for RNA-seq data☆17Updated last month
- TEFLoN uses paired-end illumina sequence data to discover and genotype transposable elements present in your samples.☆13Updated 3 years ago
- chloroplast genome assembly using long reads data☆11Updated last year