Alternatives and similar repositories for teloclip:

Users that are interested in teloclip are comparing it to the libraries listed below

• JanaSperschneider / FindTelomeres
  A python script for finding telomeric repeats (TTAGGG/CCCTAA) in FASTA files
  ☆33Updated 2 years ago
• lh3 / calN50
  Compute N50/NG50 and auN/auNG
  ☆31Updated last year
• ablab / TandemTools
  Tool for assessing/improving assembly quality in extra-long tandem repeats
  ☆46Updated 4 years ago
• ChongLab / Inspector
  A tool for evaluate long-read de novo assembly results
  ☆44Updated 7 months ago
• RolandFaure / Hairsplitter
  Software that separates very close sequences that have been collapsed during assembly. Uses only long reads.
  ☆34Updated last month
• HuffordLab / GenomeQC
  ☆32Updated 4 years ago
• MoinSebi / gretl
  Statistics and analysis for variation graphs
  ☆39Updated 3 months ago
• ablab / VerityMap
  ☆34Updated 2 years ago
• micahvista / VACmap
  VACmap: a long-read aligner specifically designed for complex structural variation discovery
  ☆34Updated 4 months ago
• shingocat / lrscaf
  TGS scaffolding
  ☆46Updated 3 years ago
• mrvollger / NucFreq
  ☆35Updated last year
• PacificBiosciences / pbipa
  Improved Phased Assembler
  ☆28Updated 3 years ago
• schmeing / gapless
  Gapless provides combined scaffolding, gap-closing and assembly correction with long reads
  ☆35Updated 2 years ago
• rlorigro / GFAse
  Tool for globally phasing diploid assembly graphs with orthogonal data
  ☆39Updated 4 months ago
• baozg / phased-assembly-check
  ☆29Updated 2 months ago
• piosierra / pantera
  Identification of transposable element families from pangenome polymorphisms
  ☆44Updated 3 weeks ago
• wtsi-hpag / Scaff10X
  Pipeline for scaffolding and breaking a genome assembly using 10x genomics linked-reads
  ☆22Updated 2 years ago
• davidemms / STAG
  STAG: Species Tree from All Genes
  ☆34Updated 6 years ago
• CAFS-bioinformatics / LR_Gapcloser
  use long sequenced reads to close gaps in assemblies
  ☆37Updated 6 years ago
• zy-optimistic / GAEP
  A genome assembly assessment pipeline.
  ☆37Updated last year
• slimsuite / chromsyn
  Chromosome-level synteny plotting using orthologous regions
  ☆29Updated 6 months ago
• KolmogorovLab / hapdiff
  SV calling for diploid assemblies
  ☆26Updated last year
• daewoooo / SVbyEye
  ☆77Updated last month
• TF-Chan-Lab / panGraphViewer
  Show pangenome graphs in an easy way
  ☆55Updated 2 years ago
• srividya22 / geneLift
  Gene model transfer from closely related reference genomes using cDNA alignments
  ☆10Updated 4 years ago
• i10labtitech / GINGER
  ☆27Updated last year
• maickrau / ribotin
  ☆32Updated 2 weeks ago
• Yandell-Lab / maker
  Genome Annotation Pipeline
  ☆35Updated 7 months ago
• bergmanlab / TELR
  TELR is a fast non-reference transposable element detector from long read sequencing data.
  ☆33Updated last year
• Maggi-Chen / Inspector
  A tool for evaluating long-read de novo assembly results
  ☆33Updated 7 months ago