dfguan / assetLinks
assembly evaluation tool
☆35Updated 3 years ago
Alternatives and similar repositories for asset
Users that are interested in asset are comparing it to the libraries listed below
Sorting:
- Tool for assessing/improving assembly quality in extra-long tandem repeats☆47Updated 4 years ago
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 5 years ago
- SV calling for diploid assemblies☆29Updated last year
- ☆38Updated 3 weeks ago
- A Hi-C scaffolding method☆22Updated 3 years ago
- Genome alignment and synteny plots☆32Updated 2 years ago
- A tool for the recovery of unassembled telomeres from soft-clipped read alignments.☆44Updated this week
- A Plant Presence/absence Variants Scanner and Pan-genome Construction Pipeline☆27Updated 4 years ago
- Create a pseudohaploid assembly from a partially resolved diploid assembly☆32Updated 5 years ago
- Gapless provides combined scaffolding, gap-closing and assembly correction with long reads☆38Updated 2 years ago
- use variant nesting information to flter overlapping sites from vg deconstruct output☆26Updated 4 months ago
- A tool for recovering synteny blocks from multiple alignment☆31Updated 4 years ago
- ☆31Updated 5 years ago
- Statistics and analysis for variation graphs☆45Updated 10 months ago
- ☆43Updated last year
- Identification of segmental duplications in the genome☆27Updated 3 years ago
- We developed GenomeSyn as a new tool for constructing and visualizing genome synteny, its novel design and implementation can serve as a …☆30Updated 3 years ago
- ☆31Updated 5 months ago
- Toolkit for evolutionary analyses of linkage groups☆32Updated last year
- ☆28Updated last year
- Add multiple thread function for genome comparison☆16Updated 4 years ago
- Pipeline to detect PAVs (presence/absence variations) in genome comparison using whole genome alignment.☆29Updated 7 years ago
- Compute N50/NG50 and auN/auNG☆33Updated 2 years ago
- FastK based version of Merqury☆28Updated last month
- Tool for globally phasing diploid assembly graphs with orthogonal data☆41Updated 11 months ago
- ☆37Updated 2 years ago
- A module for improving the insertion sequences of structural variant calls☆32Updated 4 years ago
- A pipeline for scaffolding a genome assembly using Hi-C☆13Updated 2 years ago
- Domain based annotation of transposable elements☆20Updated 3 weeks ago
- WinPCA. A package for windowed principal component analysis.☆38Updated this week