Better Alignments with Translated HMMER
☆27Jun 15, 2026Updated last month
Alternatives and similar repositories for BATH
Users that are interested in BATH are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- a precise pangenome browser combining linear and graph-based pan-genome☆13Jul 16, 2024Updated 2 years ago
- PanEffect is a JavaScript framework to explore variant effects across a pangenome. The tool has two views that allows a user to (1) expl…☆13Jan 30, 2024Updated 2 years ago
- An experimental tool to estimate the similarity between all pairs of contigs☆40Apr 12, 2021Updated 5 years ago
- plane sweep filtering genome alignments☆24May 23, 2026Updated last month
- Genotyping lots of samples with big pangenomes☆11Oct 30, 2025Updated 8 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆18Jan 29, 2025Updated last year
- Rust package for constructing and analyzing phylogenies. (unpolished & unmaintained)☆15May 1, 2025Updated last year
- lace up GFA files using panSN path name sub-ranges to coordinate the lacing☆14Jul 30, 2025Updated 11 months ago
- ☆21Dec 13, 2024Updated last year
- Identifying large scale inversions between two genomes by mapping genome 1's unique kmers onto genome 2.☆10Jun 6, 2025Updated last year
- blastn2dotplots: multiple dot-plot visualizer☆28Sep 15, 2025Updated 10 months ago
- Efficient indexing and querying of annotations in a pangenome graph☆10Oct 29, 2025Updated 8 months ago
- long-read depth breaking☆12Apr 19, 2018Updated 8 years ago
- A genome-scale, fast, and precise segmental duplications mapping tool☆36Sep 11, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A viewer for multiple alignment format (MAF) files in JBrowse 2☆14Jun 3, 2026Updated last month
- Command line tools for IntSpan related bioinformatics operations☆12Apr 9, 2025Updated last year
- de Bruijn graph cOrrectiOn from graph aLignment☆11Jul 20, 2020Updated 6 years ago
- ☆39Feb 22, 2023Updated 3 years ago
- Nail is an Alignment Inference tooL☆64Jul 10, 2026Updated last week
- Invertory of TE-gene isoforms☆14Sep 18, 2023Updated 2 years ago
- ☆11Apr 20, 2018Updated 8 years ago
- ☆136Aug 29, 2024Updated last year
- gia: Genomic Interval Arithmetic☆67Aug 21, 2024Updated last year
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- A method for measuring chromosome-specific telomere length from long reads☆22May 20, 2024Updated 2 years ago
- Learning and Aligning Large Protein Families with support of protein language models.☆32Updated this week
- Identification of transposable element families from pangenome polymorphisms☆57Jun 8, 2026Updated last month
- Evaluating genome assemblies☆123Mar 3, 2026Updated 4 months ago
- Minimum plain text representation of kmer sets☆18Jan 30, 2025Updated last year
- HELIANO is a software for detection and classification of Helitron-like elements.☆34Jul 13, 2026Updated last week
- ☆22Jul 13, 2026Updated last week
- Accompanying repository for our publications on manual curation methods for Transposable Elements.☆24Jun 26, 2024Updated 2 years ago
- ☆16Updated this week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ⛓ Correct misassemblies using linked AND long reads☆64Mar 24, 2026Updated 3 months ago
- Software package for estimating fine-scale recombination rate.☆19Jun 8, 2021Updated 5 years ago
- Efficient low-divergence mapping of long reads in minimizer space☆69Oct 7, 2023Updated 2 years ago
- Domain based annotation of transposable elements☆23Updated this week
- A tool for recovering synteny blocks from multiple alignment☆33Oct 18, 2021Updated 4 years ago
- Tool for finding matches to degenerate sequence motifs in FASTA files.☆13Mar 11, 2024Updated 2 years ago
- Build and deploy cross platform bioinformatic utilities with Rust.☆19Apr 1, 2025Updated last year