zivlab / CellRegLinks
Registration of cells across sessions.
☆76Updated last year
Alternatives and similar repositories for CellReg
Users that are interested in CellReg are comparing it to the libraries listed below
Sorting:
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆80Updated 9 months ago
- Tools to work with Allen Inst CCF data in matlab☆145Updated 6 months ago
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- Histology processing☆72Updated last month
- A curated list of awesome Neuropixels resources.☆124Updated last month
- Fiber Photometry Modular Analysis Tool Suite☆42Updated 4 years ago
- pyqt5 dependent applications for IBL sessions☆32Updated last week
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆66Updated 2 months ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆140Updated 3 weeks ago
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆65Updated last year
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆185Updated 2 weeks ago
- ☆52Updated last year
- a visualization method for neural data☆241Updated 10 months ago
- A gui for browsing joint calcium imaging + behavioral data.☆55Updated last year
- cortex lab code for electrophysiology☆85Updated 2 years ago
- SpikeGLX postprocessing [tshift filter CAR fix join extract]☆15Updated 3 weeks ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆158Updated 3 weeks ago
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆40Updated last month
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆30Updated 2 months ago
- SpikeGLX recording system GUI [Neuropixels NI]☆101Updated this week
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Updated last year
- Region Of Interest Classification and Tracking☆27Updated this week
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆73Updated 2 weeks ago
- Match suite2p ROIs between imaging sessions☆28Updated 6 years ago
- Fiber photometry analysis☆23Updated last week
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆83Updated last year
- Python package to handle probe layout, geometry and wiring to device.☆78Updated last week
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated last month
- Repository for BehaviorDEPOT pipeline app files and source code☆41Updated last month
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago