zivlab / CellReg
Registration of cells across sessions.
☆75Updated 8 months ago
Alternatives and similar repositories for CellReg
Users that are interested in CellReg are comparing it to the libraries listed below
Sorting:
- miniscope analysis pipeline with interactive visualizations☆93Updated 9 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 3 weeks ago
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆59Updated 10 months ago
- Tools to work with Allen Inst CCF data in matlab☆134Updated last year
- pyqt5 dependent applications for IBL sessions☆26Updated last month
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆34Updated last month
- Fiber Photometry Modular Analysis Tool Suite☆38Updated 3 years ago
- Histology processing☆64Updated 3 weeks ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆59Updated 2 months ago
- Fiber photometry analysis☆22Updated last month
- A gui for browsing joint calcium imaging + behavioral data.☆51Updated 3 months ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆87Updated 6 months ago
- For displaying spherically corrected visual stimulus on a flat screen.☆9Updated 4 months ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆60Updated this week
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆23Updated last month
- A curated list of awesome Neuropixels resources.☆101Updated 3 months ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆121Updated 3 months ago
- "Approaches to Study Neural Circuits" course☆65Updated 5 months ago
- Python package to handle probe layout, geometry and wiring to device.☆62Updated last week
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆49Updated last year
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆73Updated 5 months ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 7 months ago
- Match suite2p ROIs between imaging sessions☆25Updated 6 years ago
- Browser-based NWB visualization and DANDI exploration☆57Updated last week
- cortex lab code for electrophysiology☆81Updated last year
- Algorithm for automated source extraction from 1P data☆21Updated last year
- A GUI and library for doing multi-fiber photometry☆18Updated 7 years ago
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year
- Tools for processing 2P recordings☆125Updated last year