zivlab / CellRegLinks
Registration of cells across sessions.
☆76Updated last year
Alternatives and similar repositories for CellReg
Users that are interested in CellReg are comparing it to the libraries listed below
Sorting:
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆77Updated 5 months ago
- Tools to work with Allen Inst CCF data in matlab☆142Updated 2 months ago
- Histology processing☆70Updated 3 weeks ago
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- A curated list of awesome Neuropixels resources.☆113Updated 3 weeks ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆152Updated 2 weeks ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆63Updated last week
- cortex lab code for electrophysiology☆84Updated last year
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated this week
- pyqt5 dependent applications for IBL sessions☆29Updated this week
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 8 months ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆134Updated 3 months ago
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆29Updated 2 months ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆176Updated 2 months ago
- Python package to handle probe layout, geometry and wiring to device.☆72Updated this week
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆62Updated last year
- a visualization method for neural data☆236Updated 6 months ago
- Fiber Photometry Modular Analysis Tool Suite☆40Updated 4 years ago
- ☆52Updated last year
- SpikeGLX recording system GUI [Neuropixels NI]☆97Updated this week
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆78Updated 10 months ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆68Updated 2 weeks ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆40Updated this week
- Utilities for managing Neuropixel datasets and Kilosort results☆49Updated 4 months ago
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- Fiber photometry analysis☆22Updated 6 months ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆109Updated last week
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆97Updated 10 months ago
- Package for automatic post-processing and merging of multiple spike-sorting analyses.☆26Updated this week