zivlab / CellRegLinks
Registration of cells across sessions.
☆75Updated 10 months ago
Alternatives and similar repositories for CellReg
Users that are interested in CellReg are comparing it to the libraries listed below
Sorting:
- Tools to work with Allen Inst CCF data in matlab☆135Updated last year
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆74Updated 3 months ago
- Histology processing☆66Updated last month
- miniscope analysis pipeline with interactive visualizations☆94Updated 11 months ago
- A gui for browsing joint calcium imaging + behavioral data.☆52Updated 5 months ago
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆60Updated last year
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆61Updated this week
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆126Updated 2 weeks ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆147Updated last month
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆169Updated 3 months ago
- A curated list of awesome Neuropixels resources.☆107Updated 3 weeks ago
- Fiber photometry analysis☆22Updated 3 months ago
- pyqt5 dependent applications for IBL sessions☆28Updated last week
- Fiber Photometry Modular Analysis Tool Suite☆40Updated 3 years ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆75Updated 7 months ago
- Multi-probe trajectory planning in an intuitive 3D environment☆55Updated this week
- ☆52Updated 10 months ago
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆25Updated 2 weeks ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆63Updated 2 weeks ago
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆36Updated 2 weeks ago
- Python package to handle probe layout, geometry and wiring to device.☆67Updated 2 weeks ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆103Updated 7 months ago
- Match suite2p ROIs between imaging sessions☆26Updated 6 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 9 months ago
- a visualization method for neural data☆229Updated 3 months ago
- cortex lab code for electrophysiology☆83Updated last year
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆90Updated 8 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- "Approaches to Study Neural Circuits" course☆65Updated 7 months ago
- Utilities for managing Neuropixel datasets and Kilosort results☆48Updated 2 months ago