etterguillaume / MiniscopeAnalysisLinks
Analysis package for miniscope data
☆14Updated 3 years ago
Alternatives and similar repositories for MiniscopeAnalysis
Users that are interested in MiniscopeAnalysis are comparing it to the libraries listed below
Sorting:
- A package to analyse calcium imaging data recorded with the Miniscope.☆33Updated 3 years ago
- Registration of cells across sessions.☆75Updated last year
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆64Updated last year
- Region Of Interest Classification and Tracking☆27Updated last week
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Updated last year
- Calcium Data Extraction and Analysis☆49Updated 3 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 2 weeks ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- ☆52Updated last year
- Fiber Photometry Modular Analysis Tool Suite☆42Updated 4 years ago
- Tools for processing 2P recordings☆131Updated 2 years ago
- Analyze neuroscience data in the cloud☆19Updated last year
- spike extraction from calcium signals (Deneux et al., 2016)☆34Updated 5 years ago
- Activity Quantification and Analysis for molecular spatiotemporal signals☆33Updated last month
- Mesoscale activity ephys ingest schema☆11Updated 2 years ago
- An open-source ecosystem of hardware and software for head-fixed behavior☆13Updated 3 months ago
- Histology processing☆72Updated last month
- ☆41Updated 4 years ago
- A gui for browsing joint calcium imaging + behavioral data.☆54Updated 11 months ago
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆151Updated last year
- Tools to register histological section images and cell count locations to mouse brain atlas☆28Updated 3 years ago
- pyqt5 dependent applications for IBL sessions☆32Updated 3 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆80Updated 9 months ago
- Calcium imaging inter-session alignment☆15Updated last month
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Updated last year
- Tools to work with Allen Inst CCF data in matlab☆143Updated 6 months ago
- ☆12Updated 9 years ago
- motion correction☆17Updated 2 years ago