etterguillaume / MiniscopeAnalysis
Analysis package for miniscope data
☆13Updated 2 years ago
Alternatives and similar repositories for MiniscopeAnalysis
Users that are interested in MiniscopeAnalysis are comparing it to the libraries listed below
Sorting:
- A package to analyse calcium imaging data recorded with the Miniscope.☆32Updated 3 years ago
- Registration of cells across sessions.☆75Updated 8 months ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 7 months ago
- Region Of Interest Classification and Tracking☆18Updated this week
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆59Updated 10 months ago
- Histology processing☆65Updated 3 weeks ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- pyqt5 dependent applications for IBL sessions☆26Updated last month
- An open-source ecosystem of hardware and software for head-fixed behavior☆11Updated 2 weeks ago
- spike extraction from calcium signals (Deneux et al., 2016)☆29Updated 5 years ago
- motion correction☆17Updated 2 years ago
- A gui for browsing joint calcium imaging + behavioral data.☆51Updated 3 months ago
- Neuroscience/electrophsyiology data analysis tools (mostly Matlab)☆14Updated 5 years ago
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Updated last year
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆87Updated 6 months ago
- Fiber photometry analysis☆22Updated last month
- Tools to register histological section images and cell count locations to mouse brain atlas☆25Updated 2 years ago
- Match suite2p ROIs between imaging sessions☆25Updated 6 years ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆49Updated last year
- Revealing neural correlates of behavior without behavioral measurements☆14Updated 5 years ago
- Code for Functional Mixed Models for Fiber Photometry☆11Updated last month
- ☆34Updated last year
- ☆11Updated 8 years ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆25Updated last year
- Fiber Photometry Modular Analysis Tool Suite☆39Updated 3 years ago
- A GUI and library for doing multi-fiber photometry☆18Updated 7 years ago
- ☆36Updated 3 years ago
- ☆51Updated 8 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated last month
- Calcium Data Extraction and Analysis☆44Updated 2 years ago