etterguillaume / MiniscopeAnalysis
Analysis package for miniscope data
☆13Updated 2 years ago
Alternatives and similar repositories for MiniscopeAnalysis:
Users that are interested in MiniscopeAnalysis are comparing it to the libraries listed below
- A package to analyse calcium imaging data recorded with the Miniscope.☆32Updated 2 years ago
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆59Updated 9 months ago
- Registration of cells across sessions.☆73Updated 7 months ago
- Match suite2p ROIs between imaging sessions☆25Updated 5 years ago
- Region Of Interest Classification and Tracking☆16Updated this week
- motion correction☆17Updated 2 years ago
- Fiber Photometry Modular Analysis Tool Suite☆36Updated 3 years ago
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Updated last year
- spike extraction from calcium signals (Deneux et al., 2016)☆28Updated 4 years ago
- miniscope analysis pipeline with interactive visualizations☆92Updated 8 months ago
- Repository for BehaviorDEPOT pipeline app files and source code☆36Updated 5 months ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆48Updated last year
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆53Updated 10 months ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆25Updated 2 years ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆86Updated 4 months ago
- An open-source ecosystem of hardware and software for head-fixed behavior☆11Updated last month
- ☆34Updated last year
- Histology processing☆65Updated 2 weeks ago
- Calcium Data Extraction and Analysis☆43Updated 2 years ago
- A GUI and library for doing multi-fiber photometry☆18Updated 7 years ago
- A gui for browsing joint calcium imaging + behavioral data.☆51Updated 2 months ago
- ☆35Updated 3 years ago
- pyqt5 dependent applications for IBL sessions☆26Updated last week
- ☆11Updated 8 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- Revealing neural correlates of behavior without behavioral measurements☆14Updated 5 years ago
- Code for Functional Mixed Models for Fiber Photometry☆10Updated this week
- ☆51Updated 6 months ago
- Neuroscience/electrophsyiology data analysis tools (mostly Matlab)☆14Updated 5 years ago
- Browser-based NWB visualization and DANDI exploration☆53Updated this week