FeeLab / seqNMF
An algorithm for unsupervised discovery of sequential structure
☆164Updated 11 months ago
Alternatives and similar repositories for seqNMF:
Users that are interested in seqNMF are comparing it to the libraries listed below
- Pytorch implementation of LocaNMF☆34Updated 5 years ago
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆68Updated 4 years ago
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆37Updated 5 years ago
- Simple tutorial on Gaussian and Poisson GLMs for single and multi-neuron spike train data☆92Updated 2 years ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆44Updated 5 years ago
- Deconvolution of calcium imaging data☆86Updated 3 weeks ago
- Code for internal lab sharing - polishing has started but is by no means complete☆125Updated last year
- Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IB…☆42Updated last year
- NEural MOdelS, a statistical modeling framework for neuroscience.☆89Updated this week
- ☆50Updated 4 years ago
- State space models for decoding hippocampal trajectories and determining their type using sorted or clusterless data☆47Updated 4 months ago
- Archived code for reading data saved by the Open Ephys GUI☆59Updated last year
- ☆49Updated 2 years ago
- Tools for spike data analysis and visualization☆104Updated 2 years ago
- Neuroelectrophysiology object model and data analysis in Python.☆50Updated 2 months ago
- Functions to assess quality of spike sorting results☆32Updated last year
- Neyman-Scott point process model to identify sequential firing patterns in high-dimensional spike trains☆64Updated last year
- Toolbox for analyzing behavioral videos and neural activity☆57Updated last year
- miniscope analysis pipeline with interactive visualizations☆93Updated 7 months ago
- WIP: Python port of Kilosort2☆50Updated last year
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆144Updated 6 months ago
- Neural Processing Matlab Kit is a set of functions for loading and manipulating data from Blackrock Microsystems' data files (.CCF, .NEV,…☆48Updated 2 months ago
- Tools to work with Allen Inst CCF data in matlab☆127Updated 11 months ago
- A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.☆14Updated 6 years ago
- ☆22Updated 5 years ago
- YASS: Yet Another Spike Sorter☆66Updated 2 years ago
- A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA☆33Updated last year
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆112Updated 6 months ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆114Updated 3 weeks ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 5 months ago