Alternatives and similar repositories for OASIS:

Users that are interested in OASIS are comparing it to the libraries listed below

• ikinsella / locaNMF
  Pytorch implementation of LocaNMF
  ☆35Updated 5 years ago
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆92Updated 8 months ago
• zebrain-lab / Toolbox-Romano-et-al
  Computational toolbox for analysis of calcium imaging data of neuronal populations
  ☆32Updated last year
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆60Updated last year
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆133Updated this week
• paninski-lab / yass
  YASS: Yet Another Spike Sorter
  ☆66Updated 2 years ago
• RichieHakim / ROICaT
  Region Of Interest Classification and Tracking
  ☆16Updated this week
• flatironinstitute / nemos
  NEural MOdelS, a statistical modeling framework for neuroscience.
  ☆92Updated this week
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆62Updated this week
• cortex-lab / Suite2P
  Tools for processing 2P recordings
  ☆124Updated last year
• nelpy / nelpy
  Neuroelectrophysiology object model and data analysis in Python.
  ☆51Updated last week
• joao-semedo / communication-subspace
  Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)
  ☆44Updated 5 years ago
• inscopix / inscopix-cnmfe
  Algorithm for automated source extraction from 1P data
  ☆21Updated last year
• zhoupc / OASIS_matlab
  ☆35Updated 3 years ago
• cunningham-lab / neurocaas
  IaC codebase for the NeuroCAAS Platform
  ☆37Updated last year
• MLspike / spikes
  spike extraction from calcium signals (Deneux et al., 2016)
  ☆28Updated 4 years ago
• cortex-lab / sortingQuality
  Functions to assess quality of spike sorting results
  ☆32Updated last year
• catalystneuro / neuroconv
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆55Updated this week
• MouseLand / pykilosort
  WIP: Python port of Kilosort2
  ☆50Updated last year
• ransona / ROIMatchPub
  Match suite2p ROIs between imaging sessions
  ☆25Updated 5 years ago
• Whitlock-Group / HERBS
  ☆51Updated 6 months ago
• pillowlab / GLMspiketraintutorial_python
  ☆48Updated 2 years ago
• bahanonu / ciatah
  CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…
  ☆86Updated 4 months ago
• flatironinstitute / kachery-cloud
  ☆22Updated 4 months ago
• AllenInstitute / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆113Updated 7 months ago
• magland / sortingview
  Web app for viewing results of ephys spike sorting
  ☆25Updated last week
• AllenInstitute / neuroglia
  a Python machine learning library for neurophysiology data
  ☆36Updated 6 years ago
• BarbourLab / lussac
  Package for automatic post-processing and merging of multiple spike-sorting analyses.
  ☆25Updated last week
• arthur-pe / slicetca
  Library to perform Slice Tensor Component Analysis (sliceTCA)
  ☆48Updated last week
• PeyracheLab / pynacollada
  pynapple collaborative data analysis (high level python scripts)
  ☆37Updated 11 months ago