Deconvolution of calcium imaging data
☆105Jan 21, 2025Updated last year
Alternatives and similar repositories for OASIS
Users that are interested in OASIS are comparing it to the libraries listed below
Sorting:
- ☆41Sep 29, 2021Updated 4 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆159Feb 11, 2026Updated 3 weeks ago
- Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike dec…☆717Feb 19, 2026Updated last week
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆84Feb 16, 2026Updated 2 weeks ago
- Dimensionality reduction of calcium-imaged neuronal population activity☆17Feb 1, 2023Updated 3 years ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Nov 14, 2024Updated last year
- 1xbet, 1xbet crash , 1xbet crash hack game, 1xbet hack, linebet crash hack, linebet hack, melbet crash hack, crash hack هكر الطيارة, لعبة…☆15Jan 13, 2025Updated last year
- Trend Filter Denoising☆21Jul 30, 2021Updated 4 years ago
- ☆17May 26, 2023Updated 2 years ago
- An algorithm for unsupervised discovery of sequential structure☆169Mar 17, 2024Updated last year
- Fast, Simple Calcium Imaging Segmentation with Fully Convolutional Networks (https://arxiv.org/abs/1707.06314)☆29Dec 8, 2022Updated 3 years ago
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆152Aug 2, 2024Updated last year
- Voltage imaging analysis in python☆10May 25, 2021Updated 4 years ago
- Tools for processing 2P recordings☆132Oct 9, 2023Updated 2 years ago
- miniscope analysis pipeline with interactive visualizations☆98Jul 19, 2024Updated last year
- Software for the paper "Fast and robust active neuron segmentation in two-photon calcium imaging using spatio-temporal deep learning," Pr…☆67Sep 12, 2019Updated 6 years ago
- Fast Exact Spike Inference Via L0 Optimization☆15Jun 10, 2020Updated 5 years ago
- Serial-section automated anatomy extension for ScanImage☆17Feb 17, 2026Updated 2 weeks ago
- Region Of Interest Classification and Tracking☆28Feb 5, 2026Updated 3 weeks ago
- Compression, denoising and demixing of functional imaging recordings☆29Jul 11, 2018Updated 7 years ago
- Elephant is the Electrophysiology Analysis Toolkit☆232Updated this week
- ☆61Sep 5, 2022Updated 3 years ago
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆64Jun 18, 2024Updated last year
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Nov 26, 2023Updated 2 years ago
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆70Jan 31, 2026Updated last month
- Algorithm for automated source extraction from 1P data☆23Jun 16, 2023Updated 2 years ago
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆73Updated this week
- IaC codebase for the NeuroCAAS Platform☆39Dec 15, 2023Updated 2 years ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆185Jan 26, 2026Updated last month
- A GLM based approach to measure CFC☆16Oct 4, 2019Updated 6 years ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆15Mar 7, 2025Updated 11 months ago
- DataJoint Element for multi-photon calcium imaging analysis with CaImAn, Suite2p, and EXTRACT☆15May 20, 2025Updated 9 months ago
- Code published with the paper J. Mölter, L. Avitan, and G. J. Goodhill. "Detecting neural assemblies in calcium imaging data". BMC Biolog…☆11Apr 30, 2019Updated 6 years ago
- code accompanying Pellegrino*, Stein*, & Cayco-Gajic (2023).☆14Oct 7, 2024Updated last year
- A toolbox for inferring spikes from calcium traces.☆23Jun 16, 2023Updated 2 years ago
- Julia package for the Napari multi-dimensional image viewer☆11Jun 21, 2022Updated 3 years ago
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆33Sep 14, 2023Updated 2 years ago
- Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology fil…☆356Updated this week
- Jax implementation of normcorre☆14Jan 25, 2025Updated last year