PeyracheLab / miniscoPyLinks
A package to analyse calcium imaging data recorded with the Miniscope.
☆33Updated 3 years ago
Alternatives and similar repositories for miniscoPy
Users that are interested in miniscoPy are comparing it to the libraries listed below
Sorting:
- Registration of cells across sessions.☆76Updated last year
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- Region Of Interest Classification and Tracking☆27Updated last week
- Analysis package for miniscope data☆14Updated 3 years ago
- IBL core shared libraries☆66Updated this week
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆158Updated 3 weeks ago
- Match suite2p ROIs between imaging sessions☆28Updated 6 years ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆123Updated last year
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆65Updated last year
- NEural MOdelS, a statistical modeling framework for neuroscience.☆119Updated this week
- a visualization method for neural data☆241Updated 10 months ago
- Deconvolution of calcium imaging data☆105Updated last year
- Mesoscale activity ephys ingest schema☆11Updated 2 years ago
- Histology processing☆72Updated last month
- Tools for processing 2P recordings☆131Updated 2 years ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆81Updated 9 months ago
- spike extraction from calcium signals (Deneux et al., 2016)☆34Updated 5 years ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Updated last year
- Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.☆50Updated 4 years ago
- Revealing neural correlates of behavior without behavioral measurements☆16Updated 6 years ago
- SpikeGLX recording system GUI [Neuropixels NI]☆101Updated this week
- Web app for viewing results of ephys spike sorting☆27Updated 5 months ago
- Code accompanying Steinmetz et al., 2019☆60Updated 4 years ago
- "Approaches to Study Neural Circuits" course☆65Updated last year
- Python package to handle probe layout, geometry and wiring to device.☆78Updated last week
- Control and design of two-photon photostimulation experiments☆17Updated 2 years ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆140Updated 2 weeks ago
- Browser-based NWB visualization and DANDI exploration☆62Updated this week
- WIP: Python port of Kilosort2☆50Updated 2 years ago