Aharoni-Lab / Miniscope-v4Links
All things Miniscope v4
☆140Updated last year
Alternatives and similar repositories for Miniscope-v4
Users that are interested in Miniscope-v4 are comparing it to the libraries listed below
Sorting:
- Software for streaming and controlling neural and behavioral data from freely behaving animals☆126Updated last year
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆75Updated 7 months ago
- Free, platform independent, behavior tracking software.☆136Updated 3 weeks ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆169Updated 3 months ago
- Large field-of-view miniature microscope for rats and larger animals.☆16Updated 2 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆147Updated last month
- SpikeGLX recording system GUI [Neuropixels NI]☆90Updated last week
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆60Updated last year
- Registration of cells across sessions.☆75Updated 10 months ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆50Updated last year
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- Fiber photometry analysis☆22Updated 3 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆74Updated 3 months ago
- Python code for interacting with the Open Ephys GUI☆36Updated 2 months ago
- The codes, software, models, protocols, and etc. for building and using MINI2P to do the freely-moving recording and analysis. More detai…☆95Updated last year
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆103Updated 7 months ago
- miniscope analysis pipeline with interactive visualizations☆94Updated 11 months ago
- Fiber Photometry Modular Analysis Tool Suite☆40Updated 3 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 9 months ago
- Multi-probe trajectory planning in an intuitive 3D environment☆55Updated this week
- A deep learning framework for synaptic event detection☆17Updated 2 weeks ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆26Updated last year
- Tools to work with Allen Inst CCF data in matlab☆135Updated last year
- Feeding Experimentation Device version 3☆26Updated last week
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆36Updated 2 weeks ago
- ☆52Updated 10 months ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆90Updated 8 months ago
- Histology processing☆66Updated last month
- Tools to register histological section images and cell count locations to mouse brain atlas☆27Updated 3 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆61Updated last year