Aharoni-Lab / Miniscope-v4Links
All things Miniscope v4
☆146Updated 2 years ago
Alternatives and similar repositories for Miniscope-v4
Users that are interested in Miniscope-v4 are comparing it to the libraries listed below
Sorting:
- Software for streaming and controlling neural and behavioral data from freely behaving animals☆127Updated last year
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆82Updated last year
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆63Updated last year
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆55Updated 2 years ago
- SpikeGLX recording system GUI [Neuropixels NI]☆99Updated last week
- Free, platform independent, behavior tracking software.☆143Updated 5 months ago
- Registration of cells across sessions.☆75Updated last year
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆111Updated 2 months ago
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆157Updated 3 weeks ago
- Feeding Experimentation Device version 3☆31Updated 3 weeks ago
- Tools to work with Allen Inst CCF data in matlab☆143Updated 4 months ago
- The codes, software, models, protocols, and etc. for building and using MINI2P to do the freely-moving recording and analysis. More detai…☆100Updated 2 years ago
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆40Updated 2 weeks ago
- A deep learning framework for synaptic event detection☆17Updated 3 weeks ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆79Updated 7 months ago
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆70Updated 3 months ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Updated last year
- Large field-of-view miniature microscope for rats and larger animals.☆17Updated 2 years ago
- Fiber Photometry Modular Analysis Tool Suite☆42Updated 4 years ago
- Histology processing☆71Updated 2 months ago
- Matlab routines for online non-rigid motion correction of calcium imaging data☆153Updated 3 years ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆181Updated 4 months ago
- ☆52Updated last year
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- Harvey Lab miniaturized mouse VR rig hardware for virtual navigation and decision-making tasks☆43Updated last year
- BonVision is an open-source closed-loop visual environment generator developed by the Saleem Lab and Solomon Lab at the UCL Institute of …☆13Updated 6 months ago
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- Calcium Data Extraction and Analysis☆48Updated 3 years ago
- A head-mounted camera system integrates detailed behavioral monitoring with multichannel electrophysiology in freely moving mice☆28Updated 4 years ago