Aharoni-Lab / Miniscope-v4Links
All things Miniscope v4
☆144Updated 2 years ago
Alternatives and similar repositories for Miniscope-v4
Users that are interested in Miniscope-v4 are comparing it to the libraries listed below
Sorting:
- Software for streaming and controlling neural and behavioral data from freely behaving animals☆126Updated last year
- SpikeGLX recording system GUI [Neuropixels NI]☆98Updated last week
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆81Updated 11 months ago
- A deep learning framework for synaptic event detection☆17Updated this week
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆62Updated last year
- Large field-of-view miniature microscope for rats and larger animals.☆17Updated 2 years ago
- The codes, software, models, protocols, and etc. for building and using MINI2P to do the freely-moving recording and analysis. More detai…☆97Updated 2 years ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆53Updated 2 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆156Updated last month
- Registration of cells across sessions.☆75Updated last year
- Tools to work with Allen Inst CCF data in matlab☆142Updated 4 months ago
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆110Updated last month
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Updated last year
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆40Updated 2 weeks ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆179Updated 3 months ago
- BonVision is an open-source closed-loop visual environment generator developed by the Saleem Lab and Solomon Lab at the UCL Institute of …☆13Updated 5 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆78Updated 7 months ago
- ☆52Updated last year
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- Histology processing☆71Updated 2 months ago
- Complete Matlab pipeline for large scale calcium imaging data analysis☆258Updated 2 years ago
- Fiber Photometry Modular Analysis Tool Suite☆41Updated 4 years ago
- Calcium Data Extraction and Analysis☆47Updated 2 years ago
- Hardware interface for streaming up to 512 channels of neural data via USB☆53Updated 3 years ago
- Free, platform independent, behavior tracking software.☆142Updated 4 months ago
- pyqt5 dependent applications for IBL sessions☆31Updated last month
- Harvey Lab miniaturized mouse VR rig hardware for virtual navigation and decision-making tasks☆43Updated last year
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆26Updated last year
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆70Updated 2 months ago