Alternatives and similar repositories for OASIS_matlab:

Users that are interested in OASIS_matlab are comparing it to the libraries listed below

• bahanonu / ciatah
  CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…
  ☆87Updated 5 months ago
• ransona / ROIMatchPub
  Match suite2p ROIs between imaging sessions
  ☆25Updated 6 years ago
• MLspike / spikes
  spike extraction from calcium signals (Deneux et al., 2016)
  ☆29Updated 5 years ago
• bahanonu / imaging_tools
  A table containing imaging analysis tools for biology, with a focus on calcium imaging.
  ☆49Updated last year
• NTCColumbia / moco
  motion correction
  ☆17Updated 2 years ago
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆93Updated 9 months ago
• porteralab / EZcalcium
  Calcium Data Extraction and Analysis
  ☆43Updated 2 years ago
• yu-lab-vt / AQuA
  An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data
  ☆53Updated 11 months ago
• ninehundred1 / CalciumSignalExtract
  Extract regions of interest based on correlated pixel intensity
  ☆24Updated 7 years ago
• petersaj / AP_histology
  Histology processing
  ☆65Updated this week
• llerussell / Naparm
  Control and design of two-photon photostimulation experiments
  ☆16Updated last year
• schnitzer-lab / EXTRACT-public
  EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…
  ☆73Updated 4 months ago
• flatironinstitute / NoRMCorre
  Matlab routines for online non-rigid motion correction of calcium imaging data
  ☆150Updated 2 years ago
• int-brain-lab / iblapps
  pyqt5 dependent applications for IBL sessions
  ☆26Updated last week
• cortex-lab / sortingQuality
  Functions to assess quality of spike sorting results
  ☆32Updated last year
• j-friedrich / OASIS
  Deconvolution of calcium imaging data
  ☆93Updated 3 months ago
• zebrain-lab / Toolbox-Romano-et-al
  Computational toolbox for analysis of calcium imaging data of neuronal populations
  ☆32Updated last year
• gardner-lab / FinchScope
  Single photon tools for Neuroscience
  ☆35Updated last year
• wildrootlab / SHARCQ
  Tools to register histological section images and cell count locations to mouse brain atlas
  ☆25Updated 2 years ago
• YijunBao / Shallow-UNet-Neuron-Segmentation_SUNS
  ☆17Updated last year
• ryhattori / PatchWarp
  Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.
  ☆25Updated last year
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆60Updated last year
• RichieHakim / ROICaT
  Region Of Interest Classification and Tracking
  ☆18Updated this week
• cortex-lab / Suite2P
  Tools for processing 2P recordings
  ☆125Updated last year
• magland / sortingview
  Web app for viewing results of ephys spike sorting
  ☆25Updated last month
• zhoupc / CNMF_E
  Constrained Nonnegative Matrix Factorization for microEndoscopic data
  ☆146Updated 8 months ago
• deisseroth-lab / multifiber
  A GUI and library for doing multi-fiber photometry
  ☆18Updated 7 years ago
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆63Updated this week
• mikarubi / voluseg
  pipeline for volumetric cell segmentation
  ☆12Updated last month
• JaneliaSciComp / JRCLUST
  JRCLUST
  ☆34Updated 11 months ago