zhoupc / OASIS_matlab
☆33Updated 3 years ago
Related projects ⓘ
Alternatives and complementary repositories for OASIS_matlab
- spike extraction from calcium signals (Deneux et al., 2016)☆28Updated 4 years ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆83Updated last week
- Match suite2p ROIs between imaging sessions☆23Updated 5 years ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆65Updated 2 weeks ago
- motion correction☆16Updated last year
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆45Updated last year
- Tools to register histological section images and cell count locations to mouse brain atlas☆24Updated 2 years ago
- Single photon tools for Neuroscience☆35Updated 10 months ago
- Extract regions of interest based on correlated pixel intensity☆23Updated 7 years ago
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆31Updated last year
- Control and design of two-photon photostimulation experiments☆16Updated 10 months ago
- Deconvolution of calcium imaging data☆84Updated 2 months ago
- Pytorch implementation of LocaNMF☆33Updated 4 years ago
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆51Updated 6 months ago
- Matlab routines for online non-rigid motion correction of calcium imaging data☆143Updated 2 years ago
- Compression, denoising and demixing of functional imaging recordings☆28Updated 6 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆61Updated 11 months ago
- miniscope analysis pipeline with interactive visualizations☆91Updated 4 months ago
- Calcium Data Extraction and Analysis☆43Updated last year
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆123Updated 3 weeks ago
- ☆17Updated last year
- Histology processing☆64Updated 8 months ago
- Serial-section automated anatomy extension for ScanImage☆12Updated 2 months ago
- pyqt5 dependent applications for IBL sessions☆25Updated last week
- A GUI and library for doing multi-fiber photometry☆17Updated 7 years ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆24Updated 11 months ago
- ☆31Updated last year
- Z-Brain Viewer and Analysis Scripts for MAP-Mapping☆21Updated 5 years ago
- Bonsai package for controlling headborne, calcium imaging miniscopes☆12Updated 8 months ago
- MATLAB Streaming Image Viewer - a viewing and analysis platform for ultra-large 3D imaging data☆13Updated 4 years ago