cortex-lab / Suite2PLinks
Tools for processing 2P recordings
☆130Updated 2 years ago
Alternatives and similar repositories for Suite2P
Users that are interested in Suite2P are comparing it to the libraries listed below
Sorting:
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆148Updated last year
- Tools to work with Allen Inst CCF data in matlab☆143Updated 4 months ago
- Registration of cells across sessions.☆75Updated last year
- Complete Matlab pipeline for large scale calcium imaging data analysis☆259Updated 2 years ago
- miniscope analysis pipeline with interactive visualizations☆96Updated last year
- a visualization method for neural data☆239Updated 8 months ago
- cell detection in calcium imaging recordings☆417Updated 3 months ago
- spike extraction from calcium signals (Deneux et al., 2016)☆32Updated 5 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆157Updated 2 weeks ago
- SpikeGLX recording system GUI [Neuropixels NI]☆99Updated this week
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Updated last year
- Deconvolution of calcium imaging data☆101Updated 10 months ago
- pyqt5 dependent applications for IBL sessions☆31Updated 2 months ago
- GPU code for spike sorting☆189Updated last year
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆122Updated last year
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆79Updated 7 months ago
- Functions to assess quality of spike sorting results☆34Updated 2 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆63Updated last year
- Histology processing☆71Updated 2 months ago
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆138Updated 5 months ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆82Updated 11 months ago
- IBL core shared libraries☆65Updated this week
- Region Of Interest Classification and Tracking☆27Updated 3 weeks ago
- Utilities for managing Neuropixel datasets and Kilosort results☆49Updated 6 months ago
- cortex lab code for electrophysiology☆85Updated last year
- A curated list of awesome Neuropixels resources.☆120Updated 2 weeks ago
- ☆41Updated 4 years ago