cortex-lab / Suite2PLinks
Tools for processing 2P recordings
☆127Updated last year
Alternatives and similar repositories for Suite2P
Users that are interested in Suite2P are comparing it to the libraries listed below
Sorting:
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆147Updated last year
- Tools to work with Allen Inst CCF data in matlab☆140Updated 2 months ago
- Complete Matlab pipeline for large scale calcium imaging data analysis☆258Updated 2 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆151Updated 3 weeks ago
- Registration of cells across sessions.☆75Updated last year
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆94Updated 10 months ago
- Deconvolution of calcium imaging data☆98Updated 7 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated last year
- spike extraction from calcium signals (Deneux et al., 2016)☆32Updated 5 years ago
- a visualization method for neural data☆236Updated 5 months ago
- ☆52Updated last year
- SpikeGLX recording system GUI [Neuropixels NI]☆94Updated this week
- IBL core shared libraries☆63Updated this week
- Match suite2p ROIs between imaging sessions☆27Updated 6 years ago
- ☆40Updated 3 years ago
- Histology processing☆69Updated this week
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆76Updated 5 months ago
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆62Updated last year
- cell detection in calcium imaging recordings☆402Updated 2 weeks ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆77Updated 9 months ago
- Functions to assess quality of spike sorting results☆34Updated 2 years ago
- Matlab routines for online non-rigid motion correction of calcium imaging data☆152Updated 3 years ago
- Region Of Interest Classification and Tracking☆25Updated last week
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆52Updated 2 years ago
- pyqt5 dependent applications for IBL sessions☆28Updated 2 weeks ago
- Browser-based NWB visualization and DANDI exploration☆59Updated last week
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆131Updated 2 months ago
- Utilities for managing Neuropixel datasets and Kilosort results☆48Updated 4 months ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆120Updated last year