nel-lab / FIOLALinks
☆34Updated last month
Alternatives and similar repositories for FIOLA
Users that are interested in FIOLA are comparing it to the libraries listed below
Sorting:
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆53Updated last year
- ☆52Updated 9 months ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆49Updated last year
- ☆8Updated 3 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- Repo for CCN workshop on caiman and mesmerize in January 2023☆13Updated 2 years ago
- spike extraction from calcium signals (Deneux et al., 2016)☆30Updated 5 years ago
- Calcium Data Extraction and Analysis☆44Updated 2 years ago
- Activity Quantification and Analysis for molecular spatiotemporal signals☆24Updated 2 months ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆27Updated 3 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 8 months ago
- Fiji pipeline for automated serial section reconstruction and mouse brain analysis.☆29Updated last year
- ABBA - Aligning Big Brains and Atlases (2D sections to 3D atlas registration)☆49Updated 3 months ago
- Brainways☆18Updated last month
- miniscope analysis pipeline with interactive visualizations☆93Updated 11 months ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆25Updated last year
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- Analysis code for Easy Electrophysiology (www.easyelectrophysiology.com)☆16Updated 3 months ago
- motion correction☆17Updated 2 years ago
- Histology processing☆66Updated 2 weeks ago
- ☆18Updated 3 years ago
- Region Of Interest Classification and Tracking☆19Updated this week
- Rendering anatomical heatmaps with brainrender and matplotlib☆43Updated 2 weeks ago
- ☆19Updated last year
- Accurate denoising of voltage imaging data through statistically unbiased prediction, Nature Methods.☆83Updated 2 weeks ago
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆68Updated 3 weeks ago
- Segmentation of anatomical structures in a common coordinate space☆33Updated 3 weeks ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆89Updated 7 months ago
- Flow-Registration toolbox for 2P motion compensation☆24Updated 11 months ago
- A GUI and library for doing multi-fiber photometry☆18Updated 7 years ago