☆35May 19, 2025Updated last year
Alternatives and similar repositories for FIOLA
Users that are interested in FIOLA are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Repo for CCN workshop on caiman and mesmerize in January 2023☆12Mar 3, 2023Updated 3 years ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆28Dec 21, 2023Updated 2 years ago
- LightFlow: An intuitive, user-friendly framework for optics and photonics simulations, designed for educational and research applications…☆12Sep 8, 2023Updated 2 years ago
- A minimal package for saving and reading large HDF5-based chunked arrays.☆15Apr 12, 2022Updated 4 years ago
- UCLA Multiphoton Miniature Microscope☆17May 19, 2025Updated last year
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Registration of cells across sessions.☆78Jul 2, 2026Updated last month
- Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike dec…☆728Aug 2, 2026Updated last week
- Platform for Calcium Imaging analysis. DEPRECATED.☆63Nov 26, 2023Updated 2 years ago
- Voltage imaging analysis in python☆10May 25, 2021Updated 5 years ago
- Package for removing motion artifacts from two-channel imaging☆11Aug 29, 2023Updated 2 years ago
- Region Of Interest Classification and Tracking☆37Updated this week
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆101Nov 14, 2024Updated last year
- Calcium Data Extraction and Analysis☆50Dec 5, 2022Updated 3 years ago
- Code for Functional Mixed Models for Fiber Photometry☆19Jul 30, 2025Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆69Apr 23, 2026Updated 3 months ago
- ☆20Aug 17, 2020Updated 5 years ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆168Updated this week
- spike extraction from calcium signals (Deneux et al., 2016)☆36Apr 9, 2020Updated 6 years ago
- Flow-Registration toolbox for 2P motion compensation☆27Sep 16, 2025Updated 10 months ago
- Hennestad et al. 2022☆23Jun 8, 2026Updated 2 months ago
- Repo for the CZI Imaging Team's napari plugin Alfa Cohort collaboration☆11May 14, 2021Updated 5 years ago
- ☆42Sep 29, 2021Updated 4 years ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆57Sep 15, 2023Updated 2 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- DeepCAD-RT: Real-time denoising of fluorescence time-lapse imaging using deep self-supervised learning☆130May 28, 2025Updated last year
- Trend Filter Denoising☆22Jul 30, 2021Updated 5 years ago
- An automatic deep learning algorithm for spot detection in fluorescence microscopy images.☆29Apr 6, 2026Updated 4 months ago
- DataJoint Element for multi-photon calcium imaging analysis with CaImAn, Suite2p, and EXTRACT☆16May 20, 2025Updated last year
- miniscope analysis pipeline with interactive visualizations☆100Jun 30, 2026Updated last month
- Dimensionality reduction of calcium-imaged neuronal population activity☆16Feb 1, 2023Updated 3 years ago
- Tools for processing 2P recordings☆132Oct 9, 2023Updated 2 years ago
- Image processing and tools for widefield imaging☆20Dec 7, 2019Updated 6 years ago
- MATLAB analysis functions for Miniscope project.☆19Mar 16, 2017Updated 9 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- This repository contains code for morphology-free analysis of functional fluorescence microscopy. The focal algorithm, Graph-Filtered Ti…☆16Nov 1, 2023Updated 2 years ago
- ☆29Oct 22, 2025Updated 9 months ago
- A curated list of awesome Janelia software☆17Feb 26, 2025Updated last year
- The codes, software, models, protocols, and etc. for building and using MINI2P to do the freely-moving recording and analysis. More detai…☆110Oct 27, 2023Updated 2 years ago
- Demo code for CAPTURE and DANNCE☆29Jul 7, 2021Updated 5 years ago
- Python implementation of ImageJ Cell Magic Wand tool☆11Oct 28, 2016Updated 9 years ago
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆65Jun 18, 2024Updated 2 years ago