Alternatives and similar repositories for FinchScope

Users that are interested in FinchScope are comparing it to the libraries listed below

• ransona / ROIMatchPub
  Match suite2p ROIs between imaging sessions
  ☆25Updated 6 years ago
• llerussell / Naparm
  Control and design of two-photon photostimulation experiments
  ☆16Updated last year
• MLspike / spikes
  spike extraction from calcium signals (Deneux et al., 2016)
  ☆30Updated 5 years ago
• NTCColumbia / moco
  motion correction
  ☆17Updated 2 years ago
• zhoupc / OASIS_matlab
  ☆38Updated 3 years ago
• bahanonu / ciatah
  CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…
  ☆89Updated 7 months ago
• bahanonu / imaging_tools
  A table containing imaging analysis tools for biology, with a focus on calcium imaging.
  ☆49Updated last year
• simonarvin / braincoordinator
  Open-source stereotaxic coordinator
  ☆15Updated 2 years ago
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆60Updated last year
• RichieHakim / ROICaT
  Region Of Interest Classification and Tracking
  ☆19Updated last week
• cortex-lab / sortingQuality
  Functions to assess quality of spike sorting results
  ☆34Updated last year
• zebrain-lab / Toolbox-Romano-et-al
  Computational toolbox for analysis of calcium imaging data of neuronal populations
  ☆33Updated last year
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆93Updated 11 months ago
• mdhumphries / SpikeTrainCommunitiesToolBox
  MATLAB toolbox for spike-train community detection
  ☆15Updated last year
• int-brain-lab / iblapps
  pyqt5 dependent applications for IBL sessions
  ☆27Updated this week
• ikinsella / locaNMF
  Pytorch implementation of LocaNMF
  ☆36Updated 5 years ago
• JaneliaSciComp / JRCLUST
  JRCLUST
  ☆35Updated last year
• nelpy / nelpy
  Neuroelectrophysiology object model and data analysis in Python.
  ☆50Updated 3 months ago
• porteralab / EZcalcium
  Calcium Data Extraction and Analysis
  ☆44Updated 2 years ago
• int-brain-lab / ibllib
  IBL core shared libraries
  ☆63Updated this week
• JinghaoLu / MIN1PIPE
  A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.
  ☆60Updated last year
• sanworks / Bpod_Gen2
  Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)
  ☆35Updated last week
• paninski-lab / funimag
  Compression, denoising and demixing of functional imaging recordings
  ☆28Updated 6 years ago
• flatironinstitute / neurosift
  Browser-based NWB visualization and DANDI exploration
  ☆58Updated this week
• magland / sortingview
  Web app for viewing results of ephys spike sorting
  ☆26Updated 3 months ago
• petersaj / AP_histology
  Histology processing
  ☆66Updated 2 weeks ago
• SpikeInterface / spiketoolkit
  Python-based tools for pre-, post-processing, validating, and curating spike sorting datasets.
  ☆50Updated 3 years ago
• zivlab / CellReg
  Registration of cells across sessions.
  ☆75Updated 10 months ago
• mikarubi / voluseg
  pipeline for volumetric cell segmentation
  ☆12Updated this week
• llerussell / Bruker_PrairieLink
  Stream data from PrairieView into MATLAB to allow online processing and analysis
  ☆11Updated last year