visual display and analysis python code for retinotopic mapping of rodent visual cortex
☆22Aug 30, 2024Updated 2 years ago
Alternatives and similar repositories for retinotopic_mapping
Users that are interested in retinotopic_mapping are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Python TIFF Stack Reader for ScanImage 5 scans (including multiROI).☆13Sep 25, 2026Updated 2 weeks ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆16Mar 7, 2025Updated last year
- waveform classification with recordings from mouse brain using Neuropixels probes☆21Sep 29, 2022Updated 4 years ago
- A mouse brain histology tool for neuroscientists.☆13Feb 16, 2026Updated 7 months ago
- Control and design of two-photon photostimulation experiments☆18Jan 1, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Jax implementation of normcorre☆15Jan 25, 2025Updated last year
- Match suite2p ROIs between imaging sessions☆28Apr 12, 2019Updated 7 years ago
- A napari plugin to analysis point spread functions.☆11Apr 27, 2026Updated 5 months ago
- ☆12Aug 25, 2021Updated 5 years ago
- Open Neurophysiology Environment☆26Updated this week
- Tools to process widefield data☆12Jul 20, 2021Updated 5 years ago
- Tools for processing 2P recordings☆132Oct 9, 2023Updated 3 years ago
- Registration of cells across sessions.☆81Jul 2, 2026Updated 3 months ago
- ☆15Sep 20, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A Python toolbox for Fast Image Signal Separation Analysis, designed for Calcium Imaging data.☆34Updated this week
- A Python implementation of the original DI domain caller☆14Aug 2, 2020Updated 6 years ago
- Blind source separation of real signals☆18Oct 3, 2019Updated 7 years ago
- motion correction☆17Jan 27, 2023Updated 3 years ago
- Open Ephys plugins for tracking experiments☆10May 5, 2020Updated 6 years ago
- cell detection in calcium imaging recordings☆472Sep 12, 2026Updated 3 weeks ago
- Brain flatmaps generation☆13Oct 5, 2022Updated 4 years ago
- Workflows for correcting and scaffolding long-read (PacBio, nanopore) genome assemblies using optical mapping and/or Dovetail Hi-C data☆20Aug 18, 2020Updated 6 years ago
- ☆13Feb 3, 2020Updated 6 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Sample code for a Zapier engineering blog post☆14Nov 23, 2013Updated 12 years ago
- Code for Galgali et al, 2023☆15Jan 11, 2023Updated 3 years ago
- code for the paper, "flexible multitask computation in recurrent networks utilizes shared dynamical motifs"☆13Mar 2, 2025Updated last year
- ☆14Jun 6, 2024Updated 2 years ago
- An application for "evolving" near-optimal offensive play calling strategies.☆11Feb 10, 2020Updated 6 years ago
- Code for processing and analyzing the automated reconstruction of the Lee lab's Female Adult Nerve Cord EM dataset☆16May 6, 2026Updated 5 months ago
- Distributed behavioral experiments☆95Feb 19, 2025Updated last year
- code accompanying Pellegrino*, Stein*, & Cayco-Gajic (2023).☆14Oct 7, 2024Updated 2 years ago
- VISTASOFT is the main software repository of the VISTA lab at Stanford University.☆157Updated this week
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- Cookiecutter for snakemake slurm profile☆17Jul 22, 2023Updated 3 years ago
- Micro-Manager Open Source Microscopy Software (http://valelab.ucsf.edu/~MM/MMwiki/). SVN-tracking Git repository☆15Jul 14, 2016Updated 10 years ago
- GUI to compute and explore receptive fields, primarily from calcium imaging recordings☆13Jun 26, 2021Updated 5 years ago
- DataJoint Element for multi-photon calcium imaging analysis with CaImAn, Suite2p, and EXTRACT☆16May 20, 2025Updated last year
- Simple bash script that downloads and installs ANTs in a unix environment☆13Jan 28, 2025Updated last year
- Supervised and unsupervised techniques to decode signals from a population of neurons: the case of head-direction cells.☆11Mar 31, 2020Updated 6 years ago
- Data and tools from the publication "Evolution of Cortical Geometry and its Link to Function, Behaviour and Ecology" by Schwartz et al. f…☆15Feb 3, 2025Updated last year