flatironinstitute / NoRMCorre
Matlab routines for online non-rigid motion correction of calcium imaging data
☆146Updated 2 years ago
Alternatives and similar repositories for NoRMCorre:
Users that are interested in NoRMCorre are comparing it to the libraries listed below
- Complete Matlab pipeline for large scale calcium imaging data analysis☆252Updated last year
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆85Updated 3 months ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆46Updated last year
- Tools for processing 2P recordings☆124Updated last year
- ☆34Updated 3 years ago
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆144Updated 6 months ago
- Calcium Data Extraction and Analysis☆43Updated 2 years ago
- miniscope analysis pipeline with interactive visualizations☆93Updated 6 months ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆69Updated 2 months ago
- spike extraction from calcium signals (Deneux et al., 2016)☆28Updated 4 years ago
- Registration of cells across sessions.☆72Updated 5 months ago
- Tools to work with Allen Inst CCF data in matlab☆127Updated 11 months ago
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆59Updated 7 months ago
- SpikeGLX recording system GUI [Neuropixels NI]☆84Updated this week
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆127Updated this week
- Match suite2p ROIs between imaging sessions☆24Updated 5 years ago
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆54Updated 9 months ago
- Extract regions of interest based on correlated pixel intensity☆24Updated 7 years ago
- Code for internal lab sharing - polishing has started but is by no means complete☆125Updated last year
- A GUI and library for doing multi-fiber photometry☆18Updated 7 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- Deconvolution of calcium imaging data☆86Updated 3 weeks ago
- A deep learning framework for synaptic event detection☆11Updated this week
- cell detection in calcium imaging recordings☆370Updated last month
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆112Updated 5 months ago
- Single photon tools for Neuroscience☆35Updated last year
- cortex lab code for electrophysiology☆78Updated last year
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆62Updated 3 months ago
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆32Updated last year
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 4 months ago