Alternatives and similar repositories for NoRMCorre:

Users that are interested in NoRMCorre are comparing it to the libraries listed below

• flatironinstitute / CaImAn-MATLAB
  Complete Matlab pipeline for large scale calcium imaging data analysis
  ☆255Updated last year
• bahanonu / ciatah
  CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…
  ☆87Updated 5 months ago
• zhoupc / CNMF_E
  Constrained Nonnegative Matrix Factorization for microEndoscopic data
  ☆146Updated 8 months ago
• porteralab / EZcalcium
  Calcium Data Extraction and Analysis
  ☆43Updated 2 years ago
• schnitzer-lab / EXTRACT-public
  EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…
  ☆73Updated 4 months ago
• cortex-lab / Suite2P
  Tools for processing 2P recordings
  ☆125Updated last year
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆93Updated 9 months ago
• bahanonu / imaging_tools
  A table containing imaging analysis tools for biology, with a focus on calcium imaging.
  ☆49Updated last year
• zhoupc / OASIS_matlab
  ☆36Updated 3 years ago
• JinghaoLu / MIN1PIPE
  A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.
  ☆59Updated 10 months ago
• yu-lab-vt / AQuA
  An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data
  ☆53Updated 11 months ago
• zivlab / CellReg
  Registration of cells across sessions.
  ☆75Updated 8 months ago
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆140Updated 2 weeks ago
• MLspike / spikes
  spike extraction from calcium signals (Deneux et al., 2016)
  ☆29Updated 5 years ago
• nel-lab / mesmerize-core
  High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn
  ☆66Updated last month
• gardner-lab / FinchScope
  Single photon tools for Neuroscience
  ☆35Updated last year
• ransona / ROIMatchPub
  Match suite2p ROIs between imaging sessions
  ☆25Updated 6 years ago
• churchlandlab / WidefieldImager
  Pre-processing pipeline for widefield data
  ☆11Updated 4 years ago
• NTCColumbia / moco
  motion correction
  ☆17Updated 2 years ago
• ninehundred1 / CalciumSignalExtract
  Extract regions of interest based on correlated pixel intensity
  ☆24Updated 7 years ago
• cortex-lab / allenCCF
  Tools to work with Allen Inst CCF data in matlab
  ☆131Updated last year
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆60Updated last year
• buzsakilab / buzcode
  Code for internal lab sharing - polishing has started but is by no means complete
  ☆126Updated last year
• billkarsh / SpikeGLX
  SpikeGLX recording system GUI [Neuropixels NI]
  ☆87Updated 2 weeks ago
• AllenInstitute / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆114Updated 8 months ago
• MouseLand / suite2p
  cell detection in calcium imaging recordings
  ☆378Updated 3 weeks ago
• deisseroth-lab / multifiber
  A GUI and library for doing multi-fiber photometry
  ☆18Updated 7 years ago
• zebrain-lab / Toolbox-Romano-et-al
  Computational toolbox for analysis of calcium imaging data of neuronal populations
  ☆32Updated last year
• soltanianzadeh / STNeuroNet
  Software for the paper "Fast and robust active neuron segmentation in two-photon calcium imaging using spatio-temporal deep learning," Pr…
  ☆65Updated 5 years ago
• SharpWave / TENASPIS
  TENASPIS
  ☆10Updated 4 years ago