Matlab routines for online non-rigid motion correction of calcium imaging data
☆160May 29, 2022Updated 4 years ago
Alternatives and similar repositories for NoRMCorre
Users that are interested in NoRMCorre are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Complete Matlab pipeline for large scale calcium imaging data analysis☆261Jul 4, 2023Updated 3 years ago
- Constrained Nonnegative Matrix Factorization for microEndoscopic data☆155Aug 2, 2024Updated 2 years ago
- Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike dec…☆741Oct 12, 2026Updated 3 weeks ago
- ☆43Sep 29, 2021Updated 5 years ago
- Tools for processing 2P recordings☆132Oct 9, 2023Updated 3 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆103Nov 14, 2024Updated last year
- A package to analyse calcium imaging data recorded with the Miniscope.☆32Apr 11, 2022Updated 4 years ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆91Mar 11, 2026Updated 7 months ago
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆13Oct 30, 2026Updated last week
- Python package for analysis of dynamic fluorescence microscopy data☆106Mar 14, 2019Updated 7 years ago
- Analysis package for miniscope data☆14Dec 6, 2022Updated 3 years ago
- MATLAB analysis functions for Miniscope project.☆19Mar 16, 2017Updated 9 years ago
- cell detection in calcium imaging recordings☆476Sep 12, 2026Updated last month
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆171Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Registration of cells across sessions.☆82Jul 2, 2026Updated 4 months ago
- TENASPIS☆10Feb 15, 2021Updated 5 years ago
- Computational toolbox for analysis of calcium imaging data of neuronal populations☆33Sep 14, 2023Updated 3 years ago
- spike extraction from calcium signals (Deneux et al., 2016)☆36Apr 9, 2020Updated 6 years ago
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆66Jun 18, 2024Updated 2 years ago
- Calcium Data Extraction and Analysis☆50Dec 5, 2022Updated 3 years ago
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆56May 10, 2024Updated 2 years ago
- Denoising and Demixing Pipeline for in vivo Voltage Imaging Data (SGPMD-NMF)☆15Apr 24, 2023Updated 3 years ago
- Flow-Registration toolbox for 2P motion compensation☆28Sep 16, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- ☆224Jun 3, 2024Updated 2 years ago
- Match suite2p ROIs between imaging sessions☆28Apr 12, 2019Updated 7 years ago
- Compression, denoising and demixing of functional imaging recordings☆31Jul 11, 2018Updated 8 years ago
- miniscope analysis pipeline with interactive visualizations☆101Aug 25, 2026Updated 2 months ago
- Single photon tools for Neuroscience☆36Oct 29, 2025Updated last year
- Automated Neuron Reconstruction from 3D Fluorescence Microscopy Images Using Sequential Monte Carlo Estimation☆10Apr 25, 2024Updated 2 years ago
- Seeded Iterative Demixing (SID) of neuronal activity recordings made using Light Field Microscopy (LFM)☆28Feb 26, 2020Updated 6 years ago
- Deconvolution of calcium imaging data☆111Sep 28, 2026Updated last month
- Jax implementation of normcorre☆15Jan 25, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- a visualization method for neural data☆257Apr 4, 2025Updated last year
- A Matlab interface for reading and writing NWB files☆62Oct 20, 2026Updated 2 weeks ago
- motion correction☆17Jan 27, 2023Updated 3 years ago
- A parallel, cpu-based matlab implemention of the Hessian Free (HF) optimization (feed forward networks, recurrent neural networks (RNN), …☆11Sep 8, 2014Updated 12 years ago
- Guided Photometry Analysis in Python, a free and open-source FP analysis tool.☆94Updated this week
- Parameter-free statistical testing package☆12Jul 7, 2026Updated 4 months ago
- Facemap: Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also incl…☆205Jan 26, 2026Updated 9 months ago