ransona / ROIMatchPub
Match suite2p ROIs between imaging sessions
☆24Updated 5 years ago
Alternatives and similar repositories for ROIMatchPub:
Users that are interested in ROIMatchPub are comparing it to the libraries listed below
- pyqt5 dependent applications for IBL sessions☆25Updated this week
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 4 months ago
- Histology processing☆65Updated 10 months ago
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆46Updated last year
- Utilities for managing Neuropixel datasets and Kilosort results☆46Updated last year
- miniscope analysis pipeline with interactive visualizations☆93Updated 6 months ago
- Python code implementing the ZETA-test☆25Updated 5 months ago
- pynapple collaborative data analysis (high level python scripts)☆37Updated 10 months ago
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆33Updated last month
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- Browser-based NWB visualization and DANDI exploration☆51Updated this week
- Repository for BehaviorDEPOT pipeline app files and source code☆36Updated 4 months ago
- ☆52Updated 5 months ago
- Registration of cells across sessions.☆72Updated 5 months ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆85Updated 3 months ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆50Updated 2 weeks ago
- Functions to assess quality of spike sorting results☆32Updated last year
- WIP: Python port of Kilosort2☆50Updated last year
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆69Updated 2 months ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆57Updated this week
- spike extraction from calcium signals (Deneux et al., 2016)☆28Updated 4 years ago
- ☆21Updated this week
- Fiber photometry analysis☆22Updated 2 months ago
- Region Of Interest Classification and Tracking☆16Updated this week
- Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.☆54Updated this week
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆21Updated 2 weeks ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆24Updated last year
- ☆13Updated 5 years ago
- "Approaches to Study Neural Circuits" course☆65Updated 2 months ago
- Control and design of two-photon photostimulation experiments☆16Updated last year