ransona / ROIMatchPubLinks
Match suite2p ROIs between imaging sessions
☆26Updated 6 years ago
Alternatives and similar repositories for ROIMatchPub
Users that are interested in ROIMatchPub are comparing it to the libraries listed below
Sorting:
- miniscope analysis pipeline with interactive visualizations☆94Updated 11 months ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆90Updated 8 months ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆75Updated 7 months ago
- Registration of cells across sessions.☆75Updated 10 months ago
- spike extraction from calcium signals (Deneux et al., 2016)☆31Updated 5 years ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆74Updated 3 months ago
- ☆52Updated 10 months ago
- CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…☆103Updated 7 months ago
- Histology processing☆66Updated last month
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆147Updated last month
- A open toolbox of several machine learning approaches for sharp-wave ripple detection☆29Updated 11 months ago
- WIP: Python port of Kilosort2☆51Updated 2 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- ☆13Updated 5 years ago
- Functions to assess quality of spike sorting results☆34Updated last year
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year
- Multi-probe trajectory planning in an intuitive 3D environment☆55Updated this week
- Open Neurophysiology Environment☆19Updated 2 weeks ago
- Tools to work with Allen Inst CCF data in matlab☆135Updated last year
- Python code implementing the ZETA-test☆27Updated last week
- pyqt5 dependent applications for IBL sessions☆28Updated last week
- Browser-based NWB visualization and DANDI exploration☆59Updated 2 weeks ago
- A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.☆60Updated last year
- "Approaches to Study Neural Circuits" course☆65Updated 7 months ago
- MATLAB toolbox for spike-train community detection☆15Updated last year
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆126Updated 2 weeks ago
- IBL core shared libraries☆63Updated 2 weeks ago
- Control and design of two-photon photostimulation experiments☆17Updated last year
- Code for internal lab sharing - polishing has started but is by no means complete☆127Updated last year
- Region Of Interest Classification and Tracking☆19Updated last week