Alternatives and similar repositories for facemap

Users that are interested in facemap are comparing it to the libraries listed below

• neuroethology / bentoMAT
  A gui for browsing joint calcium imaging + behavioral data.
  ☆54Updated 7 months ago
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆131Updated 2 months ago
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆76Updated 5 months ago
• zivlab / CellReg
  Registration of cells across sessions.
  ☆75Updated last year
• MouseLand / rastermap
  a visualization method for neural data
  ☆236Updated 5 months ago
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆95Updated last year
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆151Updated 3 weeks ago
• petersenpeter / CellExplorer
  CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…
  ☆106Updated 9 months ago
• EnnyvanBeest / UnitMatch
  Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days
  ☆66Updated this week
• Julie-Fabre / awesome_neuropixels
  A curated list of awesome Neuropixels resources.
  ☆110Updated last month
• AllenInstitute / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆120Updated last year
• cortex-lab / allenCCF
  Tools to work with Allen Inst CCF data in matlab
  ☆140Updated 2 months ago
• Whitlock-Group / HERBS
  ☆52Updated last year
• int-brain-lab / iblapps
  pyqt5 dependent applications for IBL sessions
  ☆28Updated 2 weeks ago
• jenniferColonell / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆62Updated 2 months ago
• ThomasAkam / Point_Grey_Bonsai_multi_camera_acquisition
  Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.
  ☆15Updated 6 months ago
• cortex-lab / spikes
  cortex lab code for electrophysiology
  ☆83Updated last year
• SpikeInterface / spiketutorials
  Tutorials for using SpikeInterface on extracellular datasets.
  ☆65Updated last year
• MouseLand / pykilosort
  WIP: Python port of Kilosort2
  ☆50Updated 2 years ago
• flatironinstitute / nemos
  NEural MOdelS, a statistical modeling framework for neuroscience.
  ☆103Updated this week
• LorenFrankLab / spyglass
  Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
  ☆103Updated this week
• petersaj / AP_histology
  Histology processing
  ☆69Updated this week
• Coen-Lab / chronic-neuropixels
  CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation
  ☆29Updated last month
• buzsakilab / buzcode
  Code for internal lab sharing - polishing has started but is by no means complete
  ☆129Updated last year
• VirtualBrainLab / Pinpoint
  Multi-probe trajectory planning in an intuitive 3D environment
  ☆56Updated this week
• SpikeInterface / probeinterface
  Python package to handle probe layout, geometry and wiring to device.
  ☆72Updated 2 weeks ago
• djoshea / neuropixel-utils
  Utilities for managing Neuropixel datasets and Kilosort results
  ☆48Updated 4 months ago
• SjulsonLab / methods_class
  "Approaches to Study Neural Circuits" course
  ☆66Updated 9 months ago
• catalystneuro / neuroconv
  Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
  ☆63Updated this week
• pynapple-org / pynapple
  PYthon Neural Analysis Package
  ☆320Updated this week