Alternatives and similar repositories for facemap

Users that are interested in facemap are comparing it to the libraries listed below

• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆138Updated 5 months ago
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆79Updated 7 months ago
• MouseLand / rastermap
  a visualization method for neural data
  ☆239Updated 8 months ago
• zivlab / CellReg
  Registration of cells across sessions.
  ☆75Updated last year
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆157Updated 2 weeks ago
• VirtualBrainLab / Pinpoint
  Multi-probe trajectory planning in an intuitive 3D environment
  ☆56Updated 2 weeks ago
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆96Updated last year
• cortex-lab / allenCCF
  Tools to work with Allen Inst CCF data in matlab
  ☆143Updated 4 months ago
• AllenInstitute / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆122Updated last year
• Whitlock-Group / HERBS
  ☆52Updated last year
• EnnyvanBeest / UnitMatch
  Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days
  ☆72Updated last month
• petersenpeter / CellExplorer
  CellExplorer is a graphical user interface, a standardized processing module and data structure for exploring and classifying single cell…
  ☆111Updated last month
• petersaj / AP_histology
  Histology processing
  ☆71Updated 2 months ago
• Julie-Fabre / awesome_neuropixels
  A curated list of awesome Neuropixels resources.
  ☆120Updated 2 weeks ago
• neuroethology / bentoMAT
  A gui for browsing joint calcium imaging + behavioral data.
  ☆54Updated 10 months ago
• cortex-lab / spikes
  cortex lab code for electrophysiology
  ☆85Updated last year
• flatironinstitute / nemos
  NEural MOdelS, a statistical modeling framework for neuroscience.
  ☆111Updated this week
• jenniferColonell / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆64Updated last week
• int-brain-lab / iblapps
  pyqt5 dependent applications for IBL sessions
  ☆31Updated 2 months ago
• Coen-Lab / chronic-neuropixels
  CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation
  ☆29Updated 4 months ago
• MouseLand / pykilosort
  WIP: Python port of Kilosort2
  ☆50Updated 2 years ago
• SpikeInterface / spiketutorials
  Tutorials for using SpikeInterface on extracellular datasets.
  ☆68Updated 2 years ago
• SpikeInterface / probeinterface
  Python package to handle probe layout, geometry and wiring to device.
  ☆75Updated 2 weeks ago
• sanworks / Bpod_Gen2
  Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)
  ☆40Updated 2 weeks ago
• djoshea / neuropixel-utils
  Utilities for managing Neuropixel datasets and Kilosort results
  ☆49Updated 6 months ago
• djamesbarker / pMAT
  Fiber Photometry Modular Analysis Tool Suite
  ☆41Updated 4 years ago
• SjulsonLab / methods_class
  "Approaches to Study Neural Circuits" course
  ☆65Updated 11 months ago
• bahanonu / ciatah
  CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…
  ☆99Updated last year
• billkarsh / SpikeGLX
  SpikeGLX recording system GUI [Neuropixels NI]
  ☆99Updated this week
• MouseLand / suite2p
  cell detection in calcium imaging recordings
  ☆417Updated 3 months ago