neuroethology / bentoMAT
A gui for browsing joint calcium imaging + behavioral data.
☆51Updated 2 months ago
Alternatives and similar repositories for bentoMAT:
Users that are interested in bentoMAT are comparing it to the libraries listed below
- miniscope analysis pipeline with interactive visualizations☆92Updated 8 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 6 months ago
- Fiber Photometry Modular Analysis Tool Suite☆38Updated 3 years ago
- Repository for BehaviorDEPOT pipeline app files and source code☆36Updated 6 months ago
- CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation☆22Updated 2 weeks ago
- Registration of cells across sessions.☆74Updated 7 months ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆13Updated last month
- Histology processing☆65Updated last month
- Python code implementing the ZETA-test☆26Updated 2 weeks ago
- Fiber photometry analysis☆22Updated last week
- ☆51Updated 7 months ago
- pyqt5 dependent applications for IBL sessions☆26Updated last month
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆34Updated last week
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆59Updated last month
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆56Updated last week
- pynapple collaborative data analysis (high level python scripts)☆37Updated last year
- Code for Functional Mixed Models for Fiber Photometry☆10Updated 3 weeks ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆119Updated 2 months ago
- "Approaches to Study Neural Circuits" course☆65Updated 3 months ago
- A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.☆14Updated 6 years ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆60Updated last year
- Match suite2p ROIs between imaging sessions☆25Updated 6 years ago
- Files and instructions for manufacturing NP1.0, NP2.0alpha, and NP2.0 Neuropixels chronic recording fixtures.☆18Updated 3 weeks ago
- Algorithm for automated source extraction from 1P data☆21Updated last year
- An active learning platform for expert-guided, data efficient discovery of behavior.☆58Updated this week
- Multi-probe trajectory planning in an intuitive 3D environment☆52Updated this week
- Utilities for managing Neuropixel datasets and Kilosort results☆46Updated last year
- ☆86Updated this week
- Region Of Interest Classification and Tracking☆18Updated this week
- Python package to handle probe layout, geometry and wiring to device.☆61Updated last month