neuroethology / bentoMATLinks
A gui for browsing joint calcium imaging + behavioral data.
☆52Updated 6 months ago
Alternatives and similar repositories for bentoMAT
Users that are interested in bentoMAT are comparing it to the libraries listed below
Sorting:
- miniscope analysis pipeline with interactive visualizations☆95Updated last year
- Registration of cells across sessions.☆75Updated 11 months ago
- ☆52Updated 11 months ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆127Updated last month
- Repository for BehaviorDEPOT pipeline app files and source code☆38Updated 10 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆76Updated 3 months ago
- Histology processing☆67Updated 3 weeks ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆173Updated 2 weeks ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆15Updated 5 months ago
- Fiber Photometry Modular Analysis Tool Suite☆40Updated 4 years ago
- Multi-probe trajectory planning in an intuitive 3D environment☆56Updated 3 weeks ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆150Updated this week
- ☆93Updated 2 weeks ago
- Tools to work with Allen Inst CCF data in matlab☆138Updated 3 weeks ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆61Updated last year
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆65Updated last month
- Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)☆29Updated last month
- pyqt5 dependent applications for IBL sessions☆28Updated this week
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆193Updated 10 months ago
- Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)☆36Updated last week
- Fiber photometry analysis☆22Updated 4 months ago
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆60Updated 2 years ago
- An active learning platform for expert-guided, data efficient discovery of behavior.☆61Updated last month
- cortex lab code for electrophysiology☆83Updated last year
- a visualization method for neural data☆235Updated 4 months ago
- DLC2Action is an action segmentation package that makes running and tracking of machine learning experiments easy.☆26Updated last year
- Collection of probe description for probeinterface☆16Updated 3 weeks ago
- A Bonsai interface for real-time markerless pose estimation using DeepLabCut☆51Updated 2 months ago
- A curated list of awesome Neuropixels resources.☆109Updated this week
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆61Updated 3 weeks ago