neuroethology / bentoMAT

Related projects ⓘ

Alternatives and complementary repositories for bentoMAT

• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆91Updated 3 months ago
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆67Updated last month
• zivlab / CellReg
  Registration of cells across sessions.
  ☆69Updated 2 months ago
• djamesbarker / pMAT
  Fiber Photometry Modular Analysis Tool Suite
  ☆34Updated 3 years ago
• Whitlock-Group / HERBS
  ☆51Updated 2 months ago
• DeNardoLab / BehaviorDEPOT
  Repository for BehaviorDEPOT pipeline app files and source code
  ☆35Updated last month
• dattalab / keypoint-moseq
  ☆76Updated last week
• int-brain-lab / iblapps
  pyqt5 dependent applications for IBL sessions
  ☆25Updated this week
• ThomasAkam / Point_Grey_Bonsai_multi_camera_acquisition
  Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.
  ☆13Updated last year
• Coen-Lab / chronic-neuropixels
  CAD files for the Apollo Implant: a device for Chronic Neuropixels Implantation
  ☆17Updated this week
• petersaj / AP_histology
  Histology processing
  ☆64Updated 7 months ago
• leomol / FPA
  Fiber photometry analysis
  ☆19Updated 2 weeks ago
• Julie-Fabre / awesome_neuropixels
  A curated list of awesome Neuropixels resources.
  ☆75Updated 2 weeks ago
• jenniferColonell / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆54Updated last week
• VirtualBrainLab / Pinpoint
  Multi-probe trajectory planning in an intuitive 3D environment
  ☆46Updated 3 weeks ago
• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆122Updated last week
• EnnyvanBeest / UnitMatch
  Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days
  ☆41Updated this week
• schnitzer-lab / EXTRACT-public
  EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…
  ☆64Updated this week
• bermanlabemory / motionmapperpy
  Modified Python 3.0 implementation of MotionMapper (https://github.com/gordonberman/MotionMapper)
  ☆27Updated 5 months ago
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆112Updated last month
• inscopix / inscopix-cnmfe
  Algorithm for automated source extraction from 1P data
  ☆19Updated last year
• sanworks / Bpod_Gen2
  Repository for 2nd generation Bpod platform (formerly beta branch of Bpod repository)
  ☆29Updated last month
• SjulsonLab / methods_class
  "Approaches to Study Neural Circuits" course
  ☆63Updated 3 years ago
• JorritMontijn / zetapy
  Python code implementing the ZETA-test
  ☆24Updated last month
• kushalkolar / MESmerize
  Platform for Calcium Imaging analysis. DEPRECATED.
  ☆61Updated 11 months ago
• ETHZ-INS / DLCAnalyzer
  R Scripts to analyze deep lab cut point data and related data
  ☆60Updated last year
• PeyracheLab / pynacollada
  pynapple collaborative data analysis (high level python scripts)
  ☆37Updated 7 months ago
• YttriLab / A-SOID
  An active learning platform for expert-guided, data efficient discovery of behavior.
  ☆55Updated 5 months ago
• djoshea / neuropixel-utils
  Utilities for managing Neuropixel datasets and Kilosort results
  ☆45Updated last year
• cortex-lab / allenCCF
  Tools to work with Allen Inst CCF data in matlab
  ☆124Updated 8 months ago