golshanilab / UCLA_2P_MiniscopeView external linksLinks
UCLA Multiphoton Miniature Microscope
☆16May 19, 2025Updated 8 months ago
Alternatives and similar repositories for UCLA_2P_Miniscope
Users that are interested in UCLA_2P_Miniscope are comparing it to the libraries listed below
Sorting:
- Portable Miniscope Data Acquisition☆22Dec 15, 2025Updated 2 months ago
- Tools to register histological section images and cell count locations to mouse brain atlas☆28May 22, 2022Updated 3 years ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆99Nov 14, 2024Updated last year
- Python implementation of fast-oopsi, smc-oopsi, wiener, and discretize with binning☆15May 17, 2022Updated 3 years ago
- Generate a matrix of predictors corresponding to different behavioral variables and process a regression-based encoding model to obtain t…☆18Jul 14, 2019Updated 6 years ago
- Image processing and tools for widefield imaging☆19Dec 7, 2019Updated 6 years ago
- analysis scripts related to Jin et al manuscript on scRNA seq in aging mouse brain☆21Jun 14, 2024Updated last year
- Updated scripts and pipelines for processing GESTALT data at single-cell resolution☆20May 22, 2021Updated 4 years ago
- ☆41Sep 29, 2021Updated 4 years ago
- The codes, software, models, protocols, and etc. for building and using MINI2P to do the freely-moving recording and analysis. More detai…☆104Oct 27, 2023Updated 2 years ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆26Dec 21, 2023Updated 2 years ago
- Automatic ROI Detection☆19Nov 10, 2015Updated 10 years ago
- Extract regions of interest based on correlated pixel intensity☆24May 9, 2017Updated 8 years ago
- This toolbox includes routines for using principal component analysis (PCA) and independent component analysis (ICA) to extract cellular …☆26Aug 18, 2018Updated 7 years ago
- Histology processing☆72Dec 19, 2025Updated last month
- Visualization of multiple tandem mass spectrometry data☆10Jun 15, 2020Updated 5 years ago
- For managing 2P imaging datasets from preprocessing to activity trace extraction☆10Apr 12, 2019Updated 6 years ago
- Morelia is a free, open-source Python API for Pinnacle Technology devices.☆11Updated this week
- Single photon tools for Neuroscience☆36Oct 29, 2025Updated 3 months ago
- HiLo microscopy reconstruction with NLM denoising☆10Jan 28, 2025Updated last year
- Implemenation of Manifold Inference from Neural Dynamics (MIND) from Low & Lewallen et. al, '18☆30Mar 7, 2019Updated 6 years ago
- Spatial analysis of FISH data☆34May 20, 2025Updated 8 months ago
- A MATLAB toolbox for running behavioral neuroscience experiments and managing data☆32May 28, 2024Updated last year
- Tools for processing 2P recordings☆131Oct 9, 2023Updated 2 years ago
- A deep learning framework for synaptic event detection☆17Jan 21, 2026Updated 3 weeks ago
- Analysis of smFISH data☆12Aug 27, 2018Updated 7 years ago
- CORNAS is a fast method for reliable DEG calls in unreplicated conditions.☆13Jul 14, 2019Updated 6 years ago
- ☆10Dec 4, 2023Updated 2 years ago
- Software for the paper "Fast and robust active neuron segmentation in two-photon calcium imaging using spatio-temporal deep learning," Pr…☆67Sep 12, 2019Updated 6 years ago
- ☆34May 19, 2025Updated 8 months ago
- Single cell RNA-seq analysis for transcriptomic type characterization☆38Sep 17, 2025Updated 4 months ago
- Tools to work with Allen Inst CCF data in matlab☆145Jul 15, 2025Updated 7 months ago
- Adaptive Platform for Neuroscience Experiments☆43Nov 18, 2025Updated 2 months ago
- Pytorch implementation of LocaNMF☆36Feb 17, 2020Updated 6 years ago
- Python code to calculate and display the radial wavefunction and associated probabilities of Hydrogen. This is a two particle system so c…☆11Oct 30, 2018Updated 7 years ago
- A mouse brain histology tool for neuroscientists.☆13Dec 11, 2024Updated last year
- R语言代谢组学数据分析☆12Feb 29, 2016Updated 9 years ago
- Gaussian blur in Fortran and Python. Handles masked input data.☆10Mar 16, 2015Updated 10 years ago
- Calcium imaging inter-session alignment☆16Dec 18, 2025Updated last month