Alternatives and similar repositories for rastermap

Users that are interested in rastermap are comparing it to the libraries listed below

• HelmchenLabSoftware / Cascade
  Calibrated inference of spiking from calcium ΔF/F data using deep networks
  ☆140Updated this week
• AllenInstitute / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆115Updated 8 months ago
• flatironinstitute / nemos
  NEural MOdelS, a statistical modeling framework for neuroscience.
  ☆95Updated last week
• cortex-lab / allenCCF
  Tools to work with Allen Inst CCF data in matlab
  ☆134Updated last year
• zivlab / CellReg
  Registration of cells across sessions.
  ☆75Updated 8 months ago
• Julie-Fabre / awesome_neuropixels
  A curated list of awesome Neuropixels resources.
  ☆101Updated 3 months ago
• cortex-lab / spikes
  cortex lab code for electrophysiology
  ☆81Updated last year
• petersaj / neuropixels_trajectory_explorer
  Neuropixels trajectory explorer with the Allen CCF mouse atlas
  ☆73Updated last month
• billkarsh / SpikeGLX
  SpikeGLX recording system GUI [Neuropixels NI]
  ☆87Updated last month
• m-beau / NeuroPyxels
  NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…
  ☆121Updated 3 months ago
• MouseLand / facemap
  Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…
  ☆165Updated last month
• cortex-lab / KiloSort
  GPU code for spike sorting
  ☆184Updated last year
• SjulsonLab / methods_class
  "Approaches to Study Neural Circuits" course
  ☆65Updated 5 months ago
• pynapple-org / pynapple
  PYthon Neural Analysis Package
  ☆310Updated last week
• SpikeInterface / spiketutorials
  Tutorials for using SpikeInterface on extracellular datasets.
  ☆62Updated last year
• PeyracheLab / pynacollada
  pynapple collaborative data analysis (high level python scripts)
  ☆37Updated last year
• EnnyvanBeest / UnitMatch
  Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days
  ☆60Updated last week
• LorenFrankLab / spyglass
  Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF
  ☆98Updated last week
• NeuralEnsemble / elephant
  Elephant is the Electrophysiology Analysis Toolkit
  ☆211Updated last month
• open-ephys / analysis-tools
  Archived code for reading data saved by the Open Ephys GUI
  ☆61Updated 2 years ago
• schnitzer-lab / EXTRACT-public
  EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…
  ☆73Updated 5 months ago
• jenniferColonell / ecephys_spike_sorting
  Modules for processing extracellular electrophysiology data from Neuropixels probes
  ☆59Updated 2 months ago
• j-friedrich / OASIS
  Deconvolution of calcium imaging data
  ☆93Updated 3 months ago
• denisecailab / minian
  miniscope analysis pipeline with interactive visualizations
  ☆93Updated 9 months ago
• MouseLand / pykilosort
  WIP: Python port of Kilosort2
  ☆51Updated last year
• Whitlock-Group / HERBS
  ☆51Updated 8 months ago
• buzsakilab / buzcode
  Code for internal lab sharing - polishing has started but is by no means complete
  ☆126Updated last year
• pillowlab / GLMspiketraintutorial_python
  ☆51Updated 2 years ago
• cortex-lab / Suite2P
  Tools for processing 2P recordings
  ☆125Updated last year
• zhoupc / CNMF_E
  Constrained Nonnegative Matrix Factorization for microEndoscopic data
  ☆147Updated 9 months ago