MouseLand / rastermapLinks
a visualization method for neural data
☆241Updated 10 months ago
Alternatives and similar repositories for rastermap
Users that are interested in rastermap are comparing it to the libraries listed below
Sorting:
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆158Updated 3 weeks ago
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆140Updated 2 weeks ago
- NEural MOdelS, a statistical modeling framework for neuroscience.☆119Updated this week
- Registration of cells across sessions.☆76Updated last year
- Tools to work with Allen Inst CCF data in matlab☆145Updated 6 months ago
- PYthon Neural Analysis Package☆348Updated this week
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆81Updated 9 months ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆185Updated last week
- A curated list of awesome Neuropixels resources.☆124Updated last month
- "Approaches to Study Neural Circuits" course☆65Updated last year
- Code accompanying Steinmetz et al., 2019☆60Updated 4 years ago
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆123Updated last year
- A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.☆15Updated 7 years ago
- ☆60Updated 3 years ago
- Histology processing☆72Updated last month
- SpikeGLX recording system GUI [Neuropixels NI]☆101Updated this week
- WIP: Python port of Kilosort2☆50Updated 2 years ago
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆46Updated 6 years ago
- miniscope analysis pipeline with interactive visualizations☆98Updated last year
- GPU code for spike sorting☆189Updated last year
- pyqt5 dependent applications for IBL sessions☆32Updated last week
- IBL core shared libraries☆66Updated this week
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆83Updated last year
- ☆52Updated last year
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆73Updated 2 weeks ago
- Elephant is the Electrophysiology Analysis Toolkit☆230Updated this week
- pynapple collaborative data analysis (high level python scripts)☆38Updated 2 months ago
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆107Updated this week
- Fitting and analysis of trial-based neural spike responses with Generalized Linear Model (GLM).☆73Updated 5 years ago
- Tutorials for using SpikeInterface on extracellular datasets.☆68Updated 2 years ago