MouseLand / rastermap
a visualization method for neural data
☆208Updated 4 months ago
Alternatives and similar repositories for rastermap:
Users that are interested in rastermap are comparing it to the libraries listed below
- NEural MOdelS, a statistical modeling framework for neuroscience.☆91Updated this week
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆112Updated 6 months ago
- Neuropixels trajectory explorer with the Allen CCF mouse atlas☆73Updated 5 months ago
- Tools to work with Allen Inst CCF data in matlab☆128Updated 11 months ago
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆130Updated 2 weeks ago
- A curated list of awesome Neuropixels resources.☆89Updated 3 weeks ago
- ☆52Updated 6 months ago
- SpikeGLX recording system GUI [Neuropixels NI]☆85Updated this week
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆114Updated last month
- Tutorials for using SpikeInterface on extracellular datasets.☆60Updated last year
- "Approaches to Study Neural Circuits" course☆65Updated 2 months ago
- Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also includes sing…☆164Updated 2 months ago
- pynapple collaborative data analysis (high level python scripts)☆37Updated 11 months ago
- Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF☆96Updated this week
- Elephant is the Electrophysiology Analysis Toolkit☆205Updated 3 weeks ago
- cortex lab code for electrophysiology☆79Updated last year
- Toolbox for analyzing behavioral videos and neural activity☆58Updated last year
- PYthon Neural Analysis Package☆300Updated this week
- WIP: Python port of Kilosort2☆50Updated last year
- Code for internal lab sharing - polishing has started but is by no means complete☆125Updated last year
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆71Updated 2 months ago
- Registration of cells across sessions.☆72Updated 6 months ago
- ☆49Updated 2 years ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆52Updated this week
- Deconvolution of calcium imaging data☆88Updated last month
- miniscope analysis pipeline with interactive visualizations☆93Updated 7 months ago
- GPU code for spike sorting☆181Updated last year
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆57Updated this week
- A gui for browsing joint calcium imaging + behavioral data.☆51Updated last month
- Histology processing☆65Updated 11 months ago