a visualization method for neural data
☆256Apr 4, 2025Updated last year
Alternatives and similar repositories for rastermap
Users that are interested in rastermap are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Facemap: Framework for predicting neural activity from mouse orofacial movements tracked using a pose estimation model. Package also incl…☆200Jan 26, 2026Updated 7 months ago
- cell detection in calcium imaging recordings☆469Aug 23, 2026Updated last week
- Fast spike sorting with drift correction☆624Apr 27, 2026Updated 4 months ago
- A Python-based module for creating flexible and robust spike sorting pipelines.☆838Updated this week
- PYthon Neural Analysis Package☆379Updated this week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- phy: interactive visualization and manual spike sorting of large-scale ephys data☆425Updated this week
- Code for "Cortical areas interact through a communication subspace", Semedo et al. (Neuron, 2019)☆50Sep 27, 2019Updated 6 years ago
- A curated list of awesome Neuropixels resources.☆145Dec 16, 2025Updated 8 months ago
- DataJoint Element for multi-photon calcium imaging analysis with CaImAn, Suite2p, and EXTRACT☆16May 20, 2025Updated last year
- NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a…☆153Aug 19, 2026Updated last week
- Automated quality control, curation and neuron classification of spike-sorted electrophysiology data. Available in MATLAB and in Python.☆250May 25, 2026Updated 3 months ago
- CIAtah (pronounced cheetah): a software package for calcium imaging analysis of one- and two-photon imaging datasets. Documentation: http…☆102Nov 14, 2024Updated last year
- Multichannel time series lossless compression in pure Python based on NumPy and zlib☆46Mar 18, 2025Updated last year
- An implementation of demixed Principal Component Analysis (a supervised linear dimensionality reduction technique)☆325Jul 29, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Zenith of Event-based Time-locked Anomalies☆15Feb 26, 2024Updated 2 years ago
- A Python API for working with Neurodata stored in the NWB Format☆224Updated this week
- Calibrated inference of spiking from calcium ΔF/F data using deep networks☆169Aug 21, 2026Updated last week
- NEural MOdelS, a statistical modeling framework for neuroscience.☆142Updated this week
- ☆224Jun 3, 2024Updated 2 years ago
- An implementation of piecewise linear time warping for multi-dimensional time series alignment☆191Aug 15, 2024Updated 2 years ago
- Ephys toolbox to match single units (electrophysiology) either within the same day (over splits) or across two days☆80Updated this week
- Compression, denoising and demixing of functional imaging recordings☆31Jul 11, 2018Updated 8 years ago
- A very simple and barebones tensor decomposition library for CP decomposition a.k.a. PARAFAC a.k.a. TCA☆39Oct 18, 2023Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- WIP: Python port of Kilosort2☆49Jul 8, 2023Updated 3 years ago
- Variational Animal Motion Embedding - A tool for time series embedding and clustering☆202Oct 3, 2024Updated last year
- ☆64Sep 5, 2022Updated 3 years ago
- Computational toolbox for large scale Calcium Imaging Analysis, including movie handling, motion correction, source extraction, spike dec…☆734Aug 2, 2026Updated 3 weeks ago
- EXTRACT is a tractable and robust automated cell extraction tool for calcium imaging, which extracts the activities of cells as time seri…☆91Mar 11, 2026Updated 5 months ago
- analysis tools for large-scale neural recordings☆17Apr 4, 2025Updated last year
- Closed-loop behavioral experiment toolkit using pose estimation of body parts.☆64Jul 1, 2023Updated 3 years ago
- ☆29Oct 22, 2025Updated 10 months ago
- Some methods for comparing network representations in deep learning and neuroscience.☆145Jul 30, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A course given at the 2017 Canadian Neuroscience meeting, Neural Signal Analysis Satellite.☆15May 13, 2018Updated 8 years ago
- Fitting and simulation of Poisson generalized linear model for single and multi-neuron spike trains (Pillow et al 2008).☆43Jul 23, 2019Updated 7 years ago
- An algorithm for unsupervised discovery of sequential structure☆177Mar 17, 2024Updated 2 years ago
- IBL core shared libraries☆68Updated this week
- Modules for processing extracellular electrophysiology data from Neuropixels probes☆130Aug 18, 2024Updated 2 years ago
- Tools for processing 2P recordings☆132Oct 9, 2023Updated 2 years ago
- Code for Galgali et al, 2023☆14Jan 11, 2023Updated 3 years ago